Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O11
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-4|CAB04259.1|  145|Caenorhabditis elegans Hypothetical pr...    75   6e-14
Z78015-2|CAB01431.1|   97|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC006762-6|ABJ99063.1|  547|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC006762-5|AAF60553.2|  684|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z81525-4|CAB04259.1|  145|Caenorhabditis elegans Hypothetical
           protein F33A8.5 protein.
          Length = 145

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 35/115 (30%), Positives = 61/115 (53%)
 Frame = +1

Query: 283 TSCVRRSAEKVEDHSRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLE 462
           TS +   A KV DHS  + +ER+ +  ++P++P +  +   + D++L + +T H  WG+ 
Sbjct: 31  TSTLNDGASKVPDHSMHFKLERLWAVGMLPILPASYFIHGPVMDAVLTVALTLHIHWGIH 90

Query: 463 AIAVDYVRASIFGPILPKIAIGLVYLISIATLGGLFYIISHDVGIANGIRQFWAI 627
            +  DY R  + G    K A   VYLI+   LG L +  ++DVGI       +++
Sbjct: 91  GVVYDYARPYVIGEAAAKAAHVGVYLITGLLLGALLHFNTNDVGITKAFELVFSL 145


>Z78015-2|CAB01431.1|   97|Caenorhabditis elegans Hypothetical
           protein R02D5.4 protein.
          Length = 97

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +1

Query: 151 TQQAMRLATQPAITQRMISSSLPVRNIMKDTKTTPILNAIRSFRTSCVRRSAEKVEDHSR 330
           T  +M L T  A T R+  +       M+ ++ TPIL   RS   SC++   E  E+  R
Sbjct: 40  THNSMELPTSSATTARIEGAR------MESSRQTPILLLNRSMSDSCLKLQIEDEEEEGR 93


>AC006762-6|ABJ99063.1|  547|Caenorhabditis elegans Hypothetical
           protein Y42G9A.6b protein.
          Length = 547

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/74 (22%), Positives = 36/74 (48%)
 Frame = +1

Query: 349 VVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYVRASIFGPILPKIAIG 528
           +VSA +   I   +     + DS L  ++       + AI++ Y+ + IFG +   +A+ 
Sbjct: 380 IVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNI-AISIGYMFSCIFGTVNLAVAVM 438

Query: 529 LVYLISIATLGGLF 570
            ++++ +   GG F
Sbjct: 439 PIFVVPMMAFGGFF 452


>AC006762-5|AAF60553.2|  684|Caenorhabditis elegans Hypothetical
           protein Y42G9A.6a protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/74 (22%), Positives = 36/74 (48%)
 Frame = +1

Query: 349 VVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYVRASIFGPILPKIAIG 528
           +VSA +   I   +     + DS L  ++       + AI++ Y+ + IFG +   +A+ 
Sbjct: 517 IVSAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNI-AISIGYMFSCIFGTVNLAVAVM 575

Query: 529 LVYLISIATLGGLF 570
            ++++ +   GG F
Sbjct: 576 PIFVVPMMAFGGFF 589


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,064
Number of Sequences: 27780
Number of extensions: 381245
Number of successful extensions: 812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)