Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O07
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-7|CAA16331.3| 629|Caenorhabditis elegans Hypothetical ... 33 0.25
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.44
U13070-11|AAK67223.1| 193|Caenorhabditis elegans Hypothetical p... 32 0.44
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 31 0.77
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 31 0.77
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72510-3|CAA96653.1| 366|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.4
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 2.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 3.1
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.1
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 29 4.1
AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical ... 29 4.1
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 27 9.5
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 9.5
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 9.5
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 9.5
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 9.5
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 9.5
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 27 9.5
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 9.5
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 9.5
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 9.5
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 9.5
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 27 9.5
>AL021481-7|CAA16331.3| 629|Caenorhabditis elegans Hypothetical
protein Y43F4B.2 protein.
Length = 629
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 441 WLRASNRRATISSILRSRRYAKTTRPISK---ITYITFSNRTHRPRQCAKSSACVTT*NW 611
W +++ + S++ R A + R IS + F+N+++RPR+ K+ V N
Sbjct: 158 WFLTNSKSHVLRSLMHYRPIANSPRGISTKRGAPLVIFNNQSYRPRETLKNGDIVARCNV 217
Query: 612 TILFR*TRKAPTCPSSIKI 668
T+ + CP S++I
Sbjct: 218 TL-----ENSRKCPGSVRI 231
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 555
R R C C K C +CC TC R CT RP C
Sbjct: 70 RPRCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 555
R R C C K C +CC TC R CT RP C
Sbjct: 72 RPRCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTC--RRFCTLSRPMC 555
R R C C K C +CC TC R CT RP C
Sbjct: 75 RPRCCCCCRPK--CCCTCCRTCCCTRCCTCCRPCC 107
>U13070-11|AAK67223.1| 193|Caenorhabditis elegans Hypothetical
protein F01F1.15 protein.
Length = 193
Score = 31.9 bits (69), Expect = 0.44
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +2
Query: 326 ATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLINEEYLAASIESACHDIQ-YPAIAKIC 502
A V K+K +V +S + +GLK++ +E +L IE AC D + Y +
Sbjct: 41 AAVDPKKKIEVGSFRVSPTGDQ--KGLKEIGYARSESHLTEIIEHACDDAKHYKLVVNTI 98
Query: 503 KDNTAHFENYIHHVLKSNTSAETMCKIVGMCNNM---KLDNIISLNKKSTNVPVK 658
+ + N H LK + S + + CN+ D ++ K + PVK
Sbjct: 99 TGKSVYVHNDATH-LKGDESPKMRYNLQNACNDFIDSHEDELLGFLKTAHQDPVK 152
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 299 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 430
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 299 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 430
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 635 SCSTK*YCPISCCYTCRRFCT--LSRPMCSI*ERDVCNFRNGPCCLCISSRSQDTGYRGT 462
+CS K C SC C+ FCT C ER + C LC+++ S +R
Sbjct: 1799 TCSAK--CGESCP-PCKAFCTNKCEHQSCGAGERGFGRDCSKLCALCVNNCSNKCAHRSC 1855
Query: 461 PIRC 450
++C
Sbjct: 1856 TLKC 1859
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 555
R R C C C +CC C R CT RP C
Sbjct: 90 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 120
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 614 CPISCCYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC 507
C CC CRR CT R C C PCC
Sbjct: 89 CRPRCCCCCRRCCTCCRTCCCTRCCTCCR----PCC 120
>Z72510-3|CAA96653.1| 366|Caenorhabditis elegans Hypothetical
protein F53B7.4 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -3
Query: 614 CP-ISCCYTCRRFCTLSRPMCSI*ERDVCNFRNGPCCLCISSRSQDTGYR 468
CP S CY C ++C S C D C + C I+ R+ T YR
Sbjct: 138 CPEYSLCYNCSKYCFSSSLECD--GLDTCG-EDESTCAFITPRTPHTSYR 184
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 555
R R C C C +CC C R CT RP C
Sbjct: 88 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 118
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 614 CPISCCYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC 507
C CC CRR CT R C C PCC
Sbjct: 87 CRPRCCCCCRRCCTCCRTCCCTRCCTCCR----PCC 118
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 330 VAVQCPTAPHSAPRFRLSHHTCGPLAHS-FG 241
+A+ PT PHSA S H+ G AHS FG
Sbjct: 211 IAISHPTPPHSAKTDTGSRHSSGSSAHSQFG 241
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 555
R R C C C +CC C R CT RP C
Sbjct: 89 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 119
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 614 CPISCCYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC 507
C CC CRR CT R C C PCC
Sbjct: 88 CRPRCCCCCRRCCTCCRTCCCTRCCTCCR----PCC 119
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 653 RARWCFSCSTK*YCPISCCYTCRRFCTLSRPMC 555
R R C C C +CC C R CT RP C
Sbjct: 90 RPRCCCCCRRCCTCCRTCC--CTRCCTCCRPCC 120
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 614 CPISCCYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC 507
C CC CRR CT R C C PCC
Sbjct: 89 CRPRCCCCCRRCCTCCRTCCCTRCCTCCR----PCC 120
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -3
Query: 599 CYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC-LCISS--RSQDTGYRGTPIRCSQPDIP 432
C C+ C + P+C C ++ P C C +S ++Q + TP +C QP P
Sbjct: 262 CQQCQNTCQQAAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTP-QCQQPSAP 319
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -3
Query: 599 CYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC-LCISS--RSQDTGYRGTPIRCSQPDIP 432
C C+ C + P+C C ++ P C C +S ++Q + TP +C QP P
Sbjct: 262 CQQCQNTCQQAAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTP-QCQQPSAP 319
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 614 CPISCCYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC 507
C CC CRR CT R C C PCC
Sbjct: 88 CRPKCCCCCRRCCTCCRTCCCTRCCTCCR----PCC 119
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 599 CYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC-LCISS--RSQDTGYRGTPIRCSQPDIP 432
C C+ C S P+C C + P C C +S ++Q + TP +C QP P
Sbjct: 84 CQQCQNTCQQSAPVCQQQCAPQCQQQFAPACQQCQNSCQQTQQCQQQCTP-QCQQPSTP 141
>AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical
protein Y50D7A.2 protein.
Length = 606
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 598 VTHADDFAHCLGRCVRFENVMYVIFE--MGRVVFAYLRDR 485
V+ DF+H LGRCV + Y+ E + R YLRD+
Sbjct: 449 VSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEYLRDQ 488
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 417 LTSLSPRNSFTNFDDISLSETSGFCFSHTVAVQCPTA 307
L SLS + +D ++S +S F T V CPTA
Sbjct: 347 LVSLSEKAQDVQSNDFTISASSAFTVISTSGVLCPTA 383
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -3
Query: 599 CYTCRRFCTLSRPMCSI*ERDVCNFRNGPCC-LCISSRSQDTGYRGTPI-RCSQPDIP 432
C C+ C P+C C F + P C C +S Q + I +C QP P
Sbjct: 175 CQQCQNTCQQYAPVCQQQCAPQCTFPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAP 232
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1541 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1586
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1522 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1567
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1578 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1623
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1541 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1586
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1522 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1567
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 410 DVKDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVL 547
++KD EY+ + + DI+ + K+ TA E+YI H +
Sbjct: 1578 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1623
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 537 ITFSNRTHRPRQCAKSSACVTT*NWTILFR*TRKAPTCPSSIKI 668
+ F+N+++RPR+ K+ V N T+ + + CP S++I
Sbjct: 733 VIFNNQSYRPRETLKNGDIVARCNVTL-----KNSRKCPGSVRI 771
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,152,983
Number of Sequences: 27780
Number of extensions: 360500
Number of successful extensions: 1213
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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