Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O04
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   0.45 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.79 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.7  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 620 ECKQSIFRRRAEHSRGSCRPTRRSTVGFLLKHTD 519
           +C  S  R+     +G+C+  R   VG+ LK  D
Sbjct: 61  QCSNSPLRKARYTEKGTCKMGREIEVGYDLKSPD 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 160 CNSCFSGTGSPNKTGNFIHR 219
           C+ C+S  G+ +K G  IH+
Sbjct: 298 CDVCYSTIGTVSKAGELIHQ 317



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 160 CNSCFSGTGSPNKTGNFIHR 219
           C+ C+S     +K+G  IH+
Sbjct: 926 CHVCYSTIQEVSKSGELIHK 945


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 160 CNSCFSGTGSPNKTGNFIHR 219
           C+ C+S     NK G  IH+
Sbjct: 577 CDVCYSTIEEANKAGELIHK 596


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 160 CNSCFSGTGSPNKTGNFIHR 219
           C+ C+S     NK G  IH+
Sbjct: 302 CDVCYSTIEEANKAGELIHK 321


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 289 IGRVFSFEGLPIRRLH 242
           + +  SFE LP RRLH
Sbjct: 47  VSKPVSFESLPNRRLH 62


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 185 PVPLKQLLQNSLFAPEPICRRSATFLIYLYV 93
           P+PL  +   ++  P  IC  SA  LI++ V
Sbjct: 182 PLPLPPIFPPTMINPSAICE-SAAQLIFMNV 211


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 185 PVPLKQLLQNSLFAPEPICRRSATFL 108
           P+PL  +   ++  P  IC  +A  L
Sbjct: 182 PLPLPPIFAPTMINPSAICESAAQLL 207


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -3

Query: 152 LFAPEPICRRSATFLIYLYVPKY--TDKIISYSYRHKFI 42
           +F PEP+C R        YV ++    +II    R  FI
Sbjct: 234 VFRPEPLCERLFEASREEYVTRHLIDGRIIGCDQRISFI 272


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 349 LHSFVHICFVGMLDLSYNLAI 287
           LH F   C++ +L L  N+A+
Sbjct: 169 LHEFYGFCYLWVLILICNIAL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,082
Number of Sequences: 336
Number of extensions: 3687
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)