Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O04
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 228 3e-60
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 213 1e-55
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 172 2e-43
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 116 2e-26
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 116 2e-26
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 78 5e-15
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 74 9e-14
U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde dehydr... 69 2e-12
U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde dehydr... 69 2e-12
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 66 2e-11
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 66 2e-11
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde dehydr... 48 6e-06
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 32 0.45
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 28 7.4
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 28 7.4
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 28 7.4
AC087794-6|AAM48554.2| 115|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81489-1|CAB04005.2| 266|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 228 bits (558), Expect = 3e-60
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 212 YTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRT 391
YTG+FINNE+V + GKTF+T NPANG+V+A+V F++GS WR
Sbjct: 29 YTGIFINNEFVPAKSGKTFETINPANGKVLAQVAEGDKTDVNIAVKAAQNAFRIGSEWRR 88
Query: 392 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADK 571
MDAS+RG L+N+LADL+ERDR LASLE+LDNGKPY +Y DL SIK LRYYAGWADK
Sbjct: 89 MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADK 148
Query: 572 IHGNVLPADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
HG +P +G YF YTRHEP GVCGQIIPWNFP+LM AW LGP
Sbjct: 149 NHGKTIPIEGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGP 191
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 213 bits (519), Expect = 1e-55
Identities = 97/160 (60%), Positives = 114/160 (71%)
Frame = +2
Query: 221 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 400
LFINNE+V + GKTF+ NPANG+++A+V FK+GS WR MDA
Sbjct: 59 LFINNEFVDAKSGKTFEFVNPANGKLLAKVAEGNRDDVDIAVEAAKKAFKIGSEWRRMDA 118
Query: 401 SERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHG 580
S RG L+N+LADL+ERDR LASLE+LDNGKPYK++Y DL SIK RYYAG+ADK HG
Sbjct: 119 SHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAYNIDLPISIKTFRYYAGYADKNHG 178
Query: 581 NVLPADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+P G YF YTRHEP GVCGQIIPWNFP+LM AW L P
Sbjct: 179 KTIPVGGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLAP 218
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 172 bits (418), Expect = 2e-43
Identities = 75/103 (72%), Positives = 84/103 (81%)
Frame = +2
Query: 392 MDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADK 571
MDAS+RG L+N+LADL+ERDR LASLE+LDNGKPY +Y DL SIK LRYYAGWADK
Sbjct: 1 MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADK 60
Query: 572 IHGNVLPADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
HG +P +G YF YTRHEP GVCGQIIPWNFP+LM AW LGP
Sbjct: 61 NHGKTIPIEGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGP 103
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 116 bits (278), Expect = 2e-26
Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Frame = +2
Query: 224 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 403
FI+ ++V SSDG+TFKT NPA + I E+ F+ G WR M A
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSAR 489
Query: 404 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 583
ERG + KLA+L+E + LA+LE+LD G Y + + SI RY+AGW DKI G
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGWCDKIQGK 549
Query: 584 VLPAD----GKYFAYTRHEPXGVCGQIIPWNFPILMAAWXL 694
+P K T EP GV G I PWN+P++M +W +
Sbjct: 550 TIPISNARPNKNLCLTLREPIGVVGLITPWNYPLMMLSWKM 590
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 116 bits (278), Expect = 2e-26
Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Frame = +2
Query: 224 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 403
FI+ ++V SSDG+TFKT NPA + I E+ F+ G WR M A
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGE-WRQMSAR 489
Query: 404 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 583
ERG + KLA+L+E + LA+LE+LD G Y + + SI RY+AGW DKI G
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGWCDKIQGK 549
Query: 584 VLPAD----GKYFAYTRHEPXGVCGQIIPWNFPILMAAWXL 694
+P K T EP GV G I PWN+P++M +W +
Sbjct: 550 TIPISNARPNKNLCLTLREPIGVVGLITPWNYPLMMLSWKM 590
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 78.2 bits (184), Expect = 5e-15
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Frame = +2
Query: 224 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPW-RTMDA 400
+I +W S G +F NP N +V+ + F W T A
Sbjct: 21 YIGGKWTASETGNSFDVLNPFNNEVVDRATNCTVKDAEKAVHSALEGF---DKWAHTYSA 77
Query: 401 SERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHG 580
+RGA+++K +++ + T LA+L T + GKP ++ G++ S +YAG A +++G
Sbjct: 78 KQRGAILHKWFEILVQRETELATLLTKEQGKPLAEAR-GEIQYSAAYFDWYAGEARRVYG 136
Query: 581 NVLPAD--GKYFAYTRHEPXGVCGQIIPWNFPILMAA 685
V+P+ + +TR EP GV I PWNFP M A
Sbjct: 137 QVVPSAVVNRLHLHTR-EPIGVVALIAPWNFPTAMIA 172
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 74.1 bits (174), Expect = 9e-14
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Frame = +2
Query: 224 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 403
FI NE+ +S K + NP+ G+ ++ FK W+
Sbjct: 31 FIGNEFARSE--KLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEAFKT---WKKTTVQ 85
Query: 404 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWA--DKIH 577
+R AL+NK+A+LIE +A LE+ D GKP + D+ ++N R +A A
Sbjct: 86 QRSALLNKVANLIEEFNDDIAILESRDQGKPIGLAKVMDIPRCVQNFRDFANAALYSLST 145
Query: 578 GNVL-PADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+L GK+ Y +++P GV G I PWN P+ + ++ L P
Sbjct: 146 STILEQPTGKFVNYVKNDPVGVAGLISPWNLPLYLLSFKLAP 187
>U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform b protein.
Length = 503
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/111 (30%), Positives = 52/111 (46%)
Frame = +2
Query: 368 KLGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLR 547
K W ER ++ K DL++ +A E + NGKP ++ D+ + +
Sbjct: 70 KAQKQWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEAK-ADVLSCVDTFY 128
Query: 548 YYAGWADKIHGNVLPADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+Y+G A + G +P D +AYTR P GV I WN+PI +W P
Sbjct: 129 FYSGIASDLLGQHVPLDASRYAYTRRLPVGVVAAIGAWNYPIQTCSWKTAP 179
>U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform a protein.
Length = 687
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/111 (30%), Positives = 52/111 (46%)
Frame = +2
Query: 368 KLGSPWRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLR 547
K W ER ++ K DL++ +A E + NGKP ++ D+ + +
Sbjct: 254 KAQKQWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEAK-ADVLSCVDTFY 312
Query: 548 YYAGWADKIHGNVLPADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+Y+G A + G +P D +AYTR P GV I WN+PI +W P
Sbjct: 313 FYSGIASDLLGQHVPLDASRYAYTRRLPVGVVAAIGAWNYPIQTCSWKTAP 363
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Frame = +2
Query: 224 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 403
F+N + +TF P GQV+A+ S W A
Sbjct: 15 FLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADA---QSAWGETTAL 71
Query: 404 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI-HG 580
+RG +++K+ADLI +A E NGKP ++ D+ +S ++ G A + G
Sbjct: 72 DRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARC-DIASSADTFDFFGGIATAVLQG 130
Query: 581 NVLPADG---KYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+ L G + AYTR EP GV G I WN+P W + P
Sbjct: 131 DSLELPGGPSQRIAYTRREPYGVVGCIGAWNYPFQTCVWKVAP 173
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Frame = +2
Query: 224 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 403
F+N + +TF P GQV+A+ S W A
Sbjct: 15 FLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADA---QSAWGETTAL 71
Query: 404 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI-HG 580
+RG +++K+ADLI +A E NGKP ++ D+ +S ++ G A + G
Sbjct: 72 DRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARC-DIASSADTFDFFGGIATAVLQG 130
Query: 581 NVLPADG---KYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+ L G + AYTR EP GV G I WN+P W + P
Sbjct: 131 DSLELPGGPSQRIAYTRREPYGVVGCIGAWNYPFQTCVWKVAP 173
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 1/157 (0%)
Frame = +2
Query: 221 LFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDA 400
L+I+ + V+S + NPA +VIA V + F + W+
Sbjct: 32 LWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAF---NTWKNTSP 88
Query: 401 SERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHG 580
R + KL LI+RD LA T++ GK D+ GD+ ++ + + + G
Sbjct: 89 LTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAE-GDVSRGLQVVEHACSVPSLMMG 147
Query: 581 NVLPADGKYF-AYTRHEPXGVCGQIIPWNFPILMAAW 688
LP + ++ P GV I P+NFP ++ W
Sbjct: 148 ETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLW 184
>U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde
dehydrogenase protein 9 protein.
Length = 531
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 1/158 (0%)
Frame = +2
Query: 218 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 397
G+F + +W S G+ ++ PAN IA VQ+ + + W +
Sbjct: 43 GVF-HGKWAAS--GQVVQSFAPANNSPIANVQNGNVQDYEIAISEAKKAY---NDWCEVP 96
Query: 398 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 577
A RG ++ ++ D + L L +L+ GK + G++ + Y G + +
Sbjct: 97 APRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGV-GEVQEYVDICDYATGLSRSLE 155
Query: 578 GNVLPADGKYFAYTRH-EPXGVCGQIIPWNFPILMAAW 688
G + P++ A P GV G I +NFP + W
Sbjct: 156 GKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGW 193
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.45
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Frame = +2
Query: 389 TMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA---- 556
T A R + +L LIE +R L + D + ++ + +L S++ + YY
Sbjct: 19 TKPAEFRKEQLLQLKKLIEENRAALTEVVWKDLRRRHEVTEPMELGGSLEEIAYYLKNLD 78
Query: 557 GWADKIHGN----VLPADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
W + LP D Y +P GV I PWN+P+ M + P
Sbjct: 79 DWMKPTYVEPTVATLPTDKPYIV---KDPKGVVLVISPWNYPVSMVLLPMIP 127
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +2
Query: 425 KLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA----GWADKIHGNVLP 592
KL IE +R L+ D + ++ + ++ +I+ + Y+ W H
Sbjct: 31 KLKKFIEENREALSEAVWKDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTF 90
Query: 593 ADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+P GV I PWN+P+ M + P
Sbjct: 91 TTALDKPVIEKDPKGVVLIISPWNYPVSMILLPMVP 126
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +2
Query: 425 KLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA----GWADKIHGNVLP 592
KL IE +R L+ D + ++ + ++ +I+ + Y+ W H
Sbjct: 31 KLKKFIEENREALSEAVWKDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTF 90
Query: 593 ADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+P GV I PWN+P+ M + P
Sbjct: 91 TTALDKPVIEKDPKGVVLIISPWNYPVSMILLPMVP 126
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Frame = +2
Query: 425 KLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA----GWADKIHGNVLP 592
KL IE +R L+ D + ++ + ++ +I+ + Y+ W H
Sbjct: 31 KLKKFIEENREALSEAVWKDLRRRHESTEILEIGMTIQEIDYFLKNIDDWVKPTHVEKTF 90
Query: 593 ADGKYFAYTRHEPXGVCGQIIPWNFPILMAAWXLGP 700
+P GV I PWN+P+ M + P
Sbjct: 91 TTALDKPVIEKDPKGVVLIISPWNYPVSMILLPMVP 126
>AC087794-6|AAM48554.2| 115|Caenorhabditis elegans Hypothetical
protein Y32G9A.11 protein.
Length = 115
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 590 AEHSRGSCRPTRRSTVGFLLKHTDHRN 510
A H RG R + G+LL HT+ +N
Sbjct: 6 ARHFRGGIRSKYQDLFGYLLAHTERKN 32
>Z81489-1|CAB04005.2| 266|Caenorhabditis elegans Hypothetical
protein C55A1.1 protein.
Length = 266
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 440 IERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYA 556
I + T L+ E+ PYKD +FG A + N YYA
Sbjct: 23 IVSETTVLSIKESFVVVVPYKDRFFGRNTAMVLNCIYYA 61
>Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical
protein F13G3.1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 545 VGFLLKHTDH-RNTSPCMVCRCPA 477
V L H H NTSPC VCRC A
Sbjct: 192 VSVLNSHVSHLHNTSPC-VCRCGA 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,097,729
Number of Sequences: 27780
Number of extensions: 345147
Number of successful extensions: 759
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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