Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O03
(671 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M69175-1|AAA36011.1| 173|Homo sapiens H-protein protein. 153 5e-37
D00723-1|BAA00625.1| 173|Homo sapiens protein ( Homo sapiens mR... 153 5e-37
BT009827-1|AAP88829.1| 173|Homo sapiens glycine cleavage system... 153 5e-37
BC020922-1|AAH20922.1| 173|Homo sapiens glycine cleavage system... 153 5e-37
BC000790-1|AAH00790.1| 173|Homo sapiens glycine cleavage system... 153 5e-37
AY533031-1|AAS59848.1| 125|Homo sapiens mitochondrial glycine c... 153 5e-37
AY310735-1|AAP50260.1| 173|Homo sapiens glycine cleavage system... 153 5e-37
CR457072-1|CAG33353.1| 173|Homo sapiens GCSH protein. 150 5e-36
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 5.0
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 5.0
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 6.6
>M69175-1|AAA36011.1| 173|Homo sapiens H-protein protein.
Length = 173
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>D00723-1|BAA00625.1| 173|Homo sapiens protein ( Homo sapiens mRNA
for hydrogen carrier protein, a component of an enzyme
complex, glycine synthase (EC 2.1.2.10). ).
Length = 173
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>BT009827-1|AAP88829.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>BC020922-1|AAH20922.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>BC000790-1|AAH00790.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>AY533031-1|AAS59848.1| 125|Homo sapiens mitochondrial glycine
cleavage system H-protein precursor protein.
Length = 125
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 2 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 61
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 62 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 121
>AY310735-1|AAP50260.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 153 bits (371), Expect = 5e-37
Identities = 67/120 (55%), Positives = 92/120 (76%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+VG +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>CR457072-1|CAG33353.1| 173|Homo sapiens GCSH protein.
Length = 173
Score = 150 bits (363), Expect = 5e-36
Identities = 66/120 (55%), Positives = 91/120 (75%)
Frame = +2
Query: 167 MRYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAA 346
+R +T+KHEWV+ + IGTVG+S++AQ+ALG+VV+ LP+V +++ DE GALESVKAA
Sbjct: 50 VRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVWTKLNKQDEFGALESVKAA 109
Query: 347 AEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLK 526
+E+YSP+SG VTE N AL P LVNKSCY +GWL ++ LSN E+ LM + Y+ Y+K
Sbjct: 110 SELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYIK 169
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 360 LYTSAAAFTLSRAPLSSPADISWPTSGSCINTTSPNAS 247
L TS+ A TLS PL + I+ T SC TT+ S
Sbjct: 758 LLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTS 795
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 360 LYTSAAAFTLSRAPLSSPADISWPTSGSCINTTSPNAS 247
L TS+ A TLS PL + I+ T SC TT+ S
Sbjct: 758 LLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTS 795
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -3
Query: 375 VPDTGLYTSAAAFTLSRAPLSSPADISWPT----SGSCINTTSPNAS*A*CDT-PTVPMF 211
VP +G TS TLS P ++W T + + ++ T PN S DT P++
Sbjct: 11552 VPSSGTDTSTTFPTLSETPYEPETTVTWLTHPAETSTTVSGTIPNFSHRGSDTAPSMVTS 11611
Query: 210 SSIDTHS 190
+DT S
Sbjct: 11612 PGVDTRS 11618
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,796,078
Number of Sequences: 237096
Number of extensions: 1991000
Number of successful extensions: 3935
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3935
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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