Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O03
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71263-2|CAA95820.1| 146|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z83103-2|CAB05472.1| 148|Caenorhabditis elegans Hypothetical pr... 142 2e-34
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 28 5.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 6.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.9
U23510-13|AAK71392.2| 425|Caenorhabditis elegans Hypothetical p... 28 6.9
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 28 6.9
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 27 9.2
U23510-14|AAO38611.1| 199|Caenorhabditis elegans Hypothetical p... 27 9.2
>Z71263-2|CAA95820.1| 146|Caenorhabditis elegans Hypothetical
protein F52A8.5 protein.
Length = 146
Score = 149 bits (360), Expect = 2e-36
Identities = 61/120 (50%), Positives = 93/120 (77%)
Frame = +2
Query: 170 RYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAAA 349
R YTKKHEWV ++ +GTVG++ +A + LG+VVFI+LPD G EIS GD +GA+ESVKAA+
Sbjct: 22 RLYTKKHEWVLVENGVGTVGITDFATEQLGDVVFIELPDEGTEISKGDSTGAVESVKAAS 81
Query: 350 EVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLKE 529
++Y+P+SGTVT+KN LE L+NKS + +GWL+++K+ + DE++ L+++ Y + K+
Sbjct: 82 DIYAPISGTVTQKNVKLEEEAGLINKSPFEKGWLYKLKVKSADELEKLLNEEQYAKFKKD 141
>Z83103-2|CAB05472.1| 148|Caenorhabditis elegans Hypothetical
protein D1025.2 protein.
Length = 148
Score = 142 bits (345), Expect = 2e-34
Identities = 56/120 (46%), Positives = 92/120 (76%)
Frame = +2
Query: 170 RYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAAA 349
R YTKKHEW+ +++++GTVG++ +A + LG+VVFI+LP+ G EI GD +GA+ESVKAA+
Sbjct: 24 RLYTKKHEWIVVNQSVGTVGITDFATEQLGDVVFIELPEAGVEIEKGDSTGAVESVKAAS 83
Query: 350 EVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLKE 529
++Y+PVSG + EKNT LE P ++NKS +GWL+R+++++ +++ L+ + Y+ + E
Sbjct: 84 DIYAPVSGKILEKNTKLEDEPGIINKSPLEKGWLYRLEITSNEQLNELLTEEQYNKFKSE 143
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 341 AAAEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGW 448
A ++ PV+ + T + L S P++ N+ C GW
Sbjct: 147 AIMRIHPPVNTSTTARPICLPSLPAVENRLCVVTGW 182
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 408 VDSNAVFFSVTVPDTGLYT-SAAAFTLSRAPLSSPADISWPTSGSCINTTSPN 253
V + V S TVP T T + AA T S+AP+ + + PTS + + T+ P+
Sbjct: 582 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPS 634
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 408 VDSNAVFFSVTVPDTGLYT-SAAAFTLSRAPLSSPADISWPTSGSCINTTSPN 253
V + V S TVP T T + AA T S+AP+ + + PTS + + T+ P+
Sbjct: 638 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPS 690
>U23510-13|AAK71392.2| 425|Caenorhabditis elegans Hypothetical
protein R12C12.8a protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 407 TPSLVNKSCYGEGWLFRIKLSNRDEVQHLMD 499
TP L+NK+ GEG L K++ D HL+D
Sbjct: 257 TPLLINKASIGEGTLLFTKMA--DSKGHLLD 285
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2
Query: 47 APSCSRAAQSVQRHGSQVSAXSGSNAG 127
APS R+AQS Q S S S SNAG
Sbjct: 773 APSDFRSAQSAQLQASPGSVGSSSNAG 799
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
C25H3.8 protein.
Length = 2148
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 374 TVTEKNTALES-TPSLVNKSCYGEGWLFRIKLSNRDEVQHLMD 499
++T L+S P L+NK+ GEG L K++ D HL+D
Sbjct: 1066 SITVSTDRLQSQAPLLINKASIGEGTLLFTKMA--DSKGHLLD 1106
>U23510-14|AAO38611.1| 199|Caenorhabditis elegans Hypothetical
protein R12C12.8b protein.
Length = 199
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 374 TVTEKNTALES-TPSLVNKSCYGEGWLFRIKLSNRDEVQHLMD 499
++T L+S P L+NK+ GEG L K++ D HL+D
Sbjct: 19 SITVSTDRLQSQAPLLINKASIGEGTLLFTKMA--DSKGHLLD 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,004,742
Number of Sequences: 27780
Number of extensions: 288369
Number of successful extensions: 663
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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