Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_O03
(671 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 26 0.38
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.66
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.66
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.66
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.66
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.66
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.66
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.66
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.5
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 6.1
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.8 bits (54), Expect = 0.38
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 143 LYYSTENKMRYYTKKHEWV 199
L+Y T+ +RYY ++ EW+
Sbjct: 713 LHYETDPCVRYYPRRKEWL 731
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D+ +ED
Sbjct: 226 RTSSCHSRYEDSRHED 241
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 666 RTDFCHIRYXDTLYED 619
RT CH RY D +ED
Sbjct: 226 RTSSCHSRYEDLRHED 241
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 354 TSAAAFTLSRAPLSSPADISWPTSGSCI 271
TS A+ + ++ P +SW + SC+
Sbjct: 232 TSLNAYLIKNQTITCPIKVSWRGNYSCL 259
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 354 TSAAAFTLSRAPLSSPADISWPTSGSCI 271
TS A+ + ++ P +SW + SC+
Sbjct: 283 TSLNAYLIKNQTITCPIKVSWRGNYSCL 310
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -3
Query: 354 TSAAAFTLSRAPLSSPADISWPTSGSCI 271
TS A+ + ++ P +SW + SC+
Sbjct: 232 TSLNAYLIKNQTITCPIKVSWRGNYSCL 259
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +2
Query: 452 FRIKLSNRDEVQHLMDQ 502
FR L NR+++QH++++
Sbjct: 9 FRRYLRNRNQLQHVLEE 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,785
Number of Sequences: 438
Number of extensions: 3791
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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