Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_O02
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase prot...   213   5e-57
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.4  

>Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 127

 Score =  213 bits (520), Expect = 5e-57
 Identities = 97/122 (79%), Positives = 110/122 (90%)
 Frame = +3

Query: 54  ALHAAVKGKLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFVK 233
           AL +A+KGKLISVIG EDTCVGFLLGG+GEINKNRHPNFMVVDKNT VSEIE+CFKRF+K
Sbjct: 2   ALLSAMKGKLISVIGHEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIK 61

Query: 234 RXXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPDD 413
           R      +INQN AELIRHVID+H+AP P+ +EIPSKDHPYDASKDSILRRAKGMFNP+D
Sbjct: 62  RDDIDIIVINQNYAELIRHVIDSHTAPTPADVEIPSKDHPYDASKDSILRRAKGMFNPED 121

Query: 414 LV 419
           ++
Sbjct: 122 MI 123


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 449  SKTCNILALAYQVVWV 402
            S  C +  +AYQV+W+
Sbjct: 1899 SDGCAVYEVAYQVIWI 1914


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,848
Number of Sequences: 2352
Number of extensions: 14348
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)