Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N23
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 396 e-111
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 395 e-110
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 395 e-110
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 395 e-110
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 395 e-110
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 395 e-110
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 395 e-110
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 394 e-110
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 388 e-108
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 371 e-103
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 316 7e-87
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 253 7e-68
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 210 5e-55
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 172 2e-43
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 172 2e-43
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 172 2e-43
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 166 1e-41
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 165 2e-41
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 121 5e-28
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 65 4e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 54 9e-08
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.54
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.54
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 29 2.2
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.2
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 6.7
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 8.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 8.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 8.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 8.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 8.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 396 bits (974), Expect = e-111
Identities = 184/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 395 bits (973), Expect = e-110
Identities = 183/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 395 bits (973), Expect = e-110
Identities = 183/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 395 bits (973), Expect = e-110
Identities = 183/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 395 bits (973), Expect = e-110
Identities = 183/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 395 bits (973), Expect = e-110
Identities = 183/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 395 bits (973), Expect = e-110
Identities = 183/188 (97%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 394 bits (970), Expect = e-110
Identities = 182/188 (96%), Positives = 187/188 (99%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
AL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 630 DYLMXILT 653
DYLM ILT
Sbjct: 188 DYLMKILT 195
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 388 bits (954), Expect = e-108
Identities = 178/190 (93%), Positives = 186/190 (97%)
Frame = +3
Query: 84 LLALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 263
+ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 64
Query: 264 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 443
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMF 124
Query: 444 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 623
ETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 624 LTDYLMXILT 653
LTDY+M ILT
Sbjct: 185 LTDYMMKILT 194
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 371 bits (912), Expect = e-103
Identities = 171/177 (96%), Positives = 176/177 (99%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 302
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 303 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 482
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 483 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXILT 653
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLM ILT
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 316 bits (777), Expect = 7e-87
Identities = 146/151 (96%), Positives = 150/151 (99%)
Frame = +3
Query: 201 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 380
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 381 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 560
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 561 PIYEGYALPHAILRLDLAGRDLTDYLMXILT 653
PIYEGYALPHAILRLDLAGRDLTDYLM ILT
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 151
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 253 bits (620), Expect = 7e-68
Identities = 110/187 (58%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 272
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 273 KYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 449
+YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 450 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 629
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
Query: 630 DYLMXIL 650
+YL +L
Sbjct: 191 EYLRVLL 197
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 210 bits (514), Expect = 5e-55
Identities = 100/189 (52%), Positives = 135/189 (71%), Gaps = 3/189 (1%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 266
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 267 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 443
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 444 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 623
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 624 LTDYLMXIL 650
+T YL+ +L
Sbjct: 189 ITKYLIKLL 197
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 172 bits (418), Expect = 2e-43
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKI 326
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 172 bits (418), Expect = 2e-43
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKI 326
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 172 bits (418), Expect = 2e-43
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDMEKI 326
LKYPIEHGI+TNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 166 bits (404), Expect = 1e-41
Identities = 75/76 (98%), Positives = 76/76 (100%)
Frame = +3
Query: 90 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 269
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 270 LKYPIEHGIITNWDDM 317
LKYPIEHGI+TNWDDM
Sbjct: 68 LKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 165 bits (401), Expect = 2e-41
Identities = 88/210 (41%), Positives = 123/210 (58%), Gaps = 21/210 (10%)
Frame = +3
Query: 84 LLALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDS 227
L A V+DNG+G K G+AG+ P+ + PS V Q V G+ D
Sbjct: 6 LPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65
Query: 228 YVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 404
++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 405 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTV 560
NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCI 185
Query: 561 PIYEGYALPHAILRLDLAGRDLTDYLMXIL 650
P+ +GY + I + +AGRD+T ++ +L
Sbjct: 186 PVADGYVIGSCIKHIPIAGRDITYFIQSLL 215
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 121 bits (291), Expect = 5e-28
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 17/203 (8%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSKR--- 257
LV D GS + GFAG++ P+ PS + Q+ GD + Q+KR
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKREKN 73
Query: 258 ---GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 401
G + P ++ G+I +W+ EKI H++ N L P EHPVL +E+
Sbjct: 74 FFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSW 133
Query: 402 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 581
N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA
Sbjct: 134 NDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYA 193
Query: 582 LPHAILRLDLAGRDLTDYLMXIL 650
+ HA+++ + G +T+ L +L
Sbjct: 194 VTHAVVKCPIGGDLITEQLAQML 216
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.3 bits (152), Expect = 4e-11
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = +3
Query: 84 LLALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 263
L ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 264 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 443
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 444 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDL 611
+ F ++ + L S + +V+DSG + G + +++R+D+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 612 AGRDLTDYL 638
G+ LT+ L
Sbjct: 176 GGKALTNKL 184
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.3 bits (152), Expect = 4e-11
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Frame = +3
Query: 84 LLALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 263
L ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 264 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 443
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 444 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDL 611
+ F ++ + L S + +V+DSG + G + +++R+D+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 612 AGRDLTDYL 638
G+ LT+ L
Sbjct: 176 GGKALTNKL 184
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 54.0 bits (124), Expect = 9e-08
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 266
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 267 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 446
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 447 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 626
+ + Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + +
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQM 357
Query: 627 TDYLMXILT 653
D L L+
Sbjct: 358 GDSLRASLS 366
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 547 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 452
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRP 171
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 234 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 413
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 414 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 566
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 91 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 198
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 87 LALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 197
LAL N KA + G D P+A F I+G ++G
Sbjct: 32 LALGTINCFHFIKASYLGHDTPQATFREIIGNKEYRG 68
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 214 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 104
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRPSWVALATRA 198
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 264 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 181
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 264 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 181
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 264 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 181
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 264 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 181
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 264 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 181
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,725,758
Number of Sequences: 27780
Number of extensions: 319275
Number of successful extensions: 1626
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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