Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N22
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 64 6e-11
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 56 2e-08
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 54 9e-08
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 46 3e-05
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 40 0.002
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.005
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 38 0.005
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 36 0.026
SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13) 36 0.034
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 35 0.045
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 32 0.32
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 32 0.42
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 31 0.56
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 31 0.97
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 29 2.2
SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_29137| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 28 5.2
SB_4913| Best HMM Match : CBF (HMM E-Value=2.9) 28 5.2
SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5) 28 5.2
SB_32709| Best HMM Match : Spectrin (HMM E-Value=8.8) 28 5.2
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 28 5.2
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_43387| Best HMM Match : DUF1103 (HMM E-Value=1.5e-07) 27 9.1
SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 9.1
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 27 9.1
SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 9.1
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +1
Query: 262 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 441
P + IV+G V ++AFL CCGA++ES CM+ TY + Y E I++
Sbjct: 59 PILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEK 118
Query: 442 SIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGN 555
++ + + + D A+ E+ R F+CCGN
Sbjct: 119 NLHGDIRSTMNEYHLSGHDAVTRAI-DEIHRDFKCCGN 155
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = +1
Query: 259 GPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIK 438
G + I VG ++ +IAF GCCGA +E+ CM++ + + + I+
Sbjct: 406 GSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQ 465
Query: 439 ESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAIN---YGQFTL---PESC 600
+ D + K+ N +A +Q FECCG G + YGQ P SC
Sbjct: 466 SDLTDDIIRNIKEYPKNN-----KAAIDAMQMDFECCGAKGPSDWTFYGQMKYKAGPGSC 520
Query: 601 C 603
C
Sbjct: 521 C 521
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 232 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXX 411
+L G I I VGA + +++F GCCGAI+E C++ T+
Sbjct: 316 ELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTAL 375
Query: 412 XFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY--GQFT 585
+ Y ++E + + + + +A + +Q++ +CCG G ++ +T
Sbjct: 376 GYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDA-YDAIQKKEKCCGINGFKDWQRSYYT 434
Query: 586 ------LPESCC 603
+P+SCC
Sbjct: 435 KGNHSIVPDSCC 446
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 16/134 (11%)
Frame = +1
Query: 253 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTY-GE 429
A G + I VG ++ +++F GC GA +E+ CM+ T+ + Y G+
Sbjct: 53 ATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGK 112
Query: 430 S--------IKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY---- 573
+ +K+ I + K ++ + F LQ + +CCG G +++
Sbjct: 113 NSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASK 172
Query: 574 ---GQFTLPESCCV 606
G T+P+SCCV
Sbjct: 173 KYNGTSTVPDSCCV 186
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +1
Query: 274 IVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESIMD 453
I+VG +MF++ F GC GA+RE+ C++ ++ F + + ++ I++
Sbjct: 51 IIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVE 110
Query: 454 GVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTG 561
+ K D NAD + + +Q++F+CCG G
Sbjct: 111 KLQTAVTKYRD-NAD--LQNLIDGVQQEFKCCGAKG 143
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Frame = +1
Query: 232 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXX 411
++ + A GP + I VG ++ ++AFLGCCGA +E+ CM++ +
Sbjct: 44 EIASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGAL 103
Query: 412 XFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY------ 573
+ + I+ + + ++ N E +++Q +F+CCG ++
Sbjct: 104 AYNNKDKIENRLDKDI-----LKAIENYPGKNEKSINDMQTKFKCCGADNYTDWQSNIKM 158
Query: 574 -GQFTLPESCC 603
++P+SCC
Sbjct: 159 KNSSSVPDSCC 169
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +1
Query: 268 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 447
IF V+G +MF I F GC GA+RE+ C + Y +T + + +++
Sbjct: 80 IFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKV-QAL 138
Query: 448 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 552
+ + KK D D + + +Q +CCG
Sbjct: 139 KERLKQDLKKYLD---DPLNQDLIDFMQTLLKCCG 170
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 232 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMV 351
DL A G I I GA++ +I+F GCCGAI+ES C++
Sbjct: 16 DLQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +1
Query: 268 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 447
IF+ +G ++FVI GC GA+RE+ C++ Y F Y + ++ +
Sbjct: 106 IFLALGGLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKV 165
Query: 448 MDGV-GVLFKKRSDANADEAAEAVFSELQRQFECCGNTG 561
+ + R D + +Q + +CCG G
Sbjct: 166 TAQLKDAIVLYRDPTKGD--LHLIIDTVQTELQCCGVQG 202
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 253 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 357
++ W I GA + + F GCCGA++ES CM+ T
Sbjct: 311 SIPAWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +1
Query: 268 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 447
+ ++VG ++F+IA +GC GA+RE+ ++ Y + + + + E +
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKL 143
Query: 448 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 552
D + K D + E + + LQ +CCG
Sbjct: 144 KDDL----KHYRDPD-KENFQFLIDRLQTNLKCCG 173
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 357
L +H A +I I +G ++ +I F+GCCGA++E C++ T
Sbjct: 208 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 248
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 357
L +H A +I I +G ++ +I F+GCCGA++E C++ T
Sbjct: 66 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 268 IFIVVGAVMFVIAFLGCCGAIRESHCMVV 354
I I GA++ I F+GCCGA++E+ C ++
Sbjct: 201 IMIAAGALVMFIGFVGCCGAVKENKCFLL 229
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +1
Query: 268 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESI 447
+ ++VG ++F+IA +GC GA+RE+ ++ Y + + + + +
Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKL 143
Query: 448 MDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 552
D + + D + E + + LQ +CCG
Sbjct: 144 KDDL----QHYRDPD-KENFQFLIDRLQTNLKCCG 173
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/105 (20%), Positives = 41/105 (39%)
Frame = +1
Query: 238 LKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXF 417
L++ + P + G +++I F GC GA++E+ + +Y F
Sbjct: 65 LQSFMLYMPTLLFFTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAF 124
Query: 418 TYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 552
+E ++D L D + + +Q +F+CCG
Sbjct: 125 LQ----REKLVDPKARLEDGLKSYQQDSSKQEFIDFIQTRFKCCG 165
>SB_14527| Best HMM Match : SAP (HMM E-Value=1.6e-13)
Length = 347
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 432 ALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQER 304
AL GE+ + D L NDDH + D + DD L + S+E+
Sbjct: 47 ALHEGEDVEGDDDLDNDDHDEDDVLADDSVDDLVAEESLSEEK 89
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 247 HLAVGPWIFIVV-GAVMFVIAFLGCCGAIRES 339
+LA P + + + G +MFVI+F GC GA+RE+
Sbjct: 13 NLATDPAVMLAIAGVLMFVISFSGCLGALREN 44
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 435 DALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHY 289
DA A ++D D +DD D DD V++ +RS E+D E Y
Sbjct: 657 DAAAAAADDDDDADDDDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 705
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -3
Query: 411 EDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDPRTDS 253
+D DHH + DH ++D V V + + +D +H+ D PR D+
Sbjct: 639 QDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHR-QDVVHPRQDA 690
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 273 EDPRTDSKMGLQ*VFDHGPVHQERYSNP 190
+DP +DS +G+ VFDHG + E Y P
Sbjct: 5 DDPLSDSNLGIS-VFDHGSTYSEPYEIP 31
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -3
Query: 399 HHLHNDDHQQKDCVRDDHAVTLAYRSTASQE--RDHEHYSPDDYEDPRTD 256
H H DH R DH +Y T + DH + D+ DP TD
Sbjct: 364 HSDHVTDHNDHVTGRSDHVTGHSYHVTGHNDYLTDHNDHVTTDHSDPLTD 413
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 262 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 360
P + I G ++ ++ +GC I+E+ ++V+Y
Sbjct: 60 PGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92
>SB_12629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 432 ALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHY 289
A A +++DAD +DD D DD V++ +RS E+D E Y
Sbjct: 380 AAADDDDDDADDD-DDDDDDDDDDDDDDDLVSIMFRSCWPSEQDLEKY 426
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 384 DDHQQKDCVRDDHAVTLAYRSTASQERD-HEHYSPDDYEDPRT 259
DDH Q+ V ++ A+T + QE H+H+ P D + R+
Sbjct: 922 DDHSQQSNV-EEQAMTATHNRKVDQESSTHDHHMPRDVRETRS 963
>SB_29137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = -1
Query: 326 APQHPKNAITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTSSRPRSATTRLKK 147
APQ P+NA T I PT + P A + ++ + + T S RS L+K
Sbjct: 1 APQQPQNATTAIMTPTAINSLDPEAYSILERARVKFALLSHLPKAFTLS--RSDVILLRK 58
Query: 146 NSTYFTKLVPHPMLR 102
+ TK + + LR
Sbjct: 59 GD-FVTKTLNNDPLR 72
>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
Length = 1191
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 197 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 75
PIP P + T ++K YFTK P MLR F++ + +
Sbjct: 118 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 157
>SB_4913| Best HMM Match : CBF (HMM E-Value=2.9)
Length = 328
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 448 MDGVGVLFKKRSDANADEAAEAVFSELQR 534
+ G+G++FK+R+ N +F ELQR
Sbjct: 55 LKGLGLMFKQRTGRNLPMTHPVIFDELQR 83
>SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)
Length = 168
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 330 YRSTASQERDHEHYSPDD 277
YR T SQ R H H++PD+
Sbjct: 104 YRRTRSQLRPHHHFAPDE 121
>SB_32709| Best HMM Match : Spectrin (HMM E-Value=8.8)
Length = 230
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 448 MDGVGVLFKKRSDANADEAAEAVFSELQR 534
+ G+G++FK+R+ N +F ELQR
Sbjct: 55 LKGLGLMFKQRTGRNLPMTHPVIFDELQR 83
>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
Length = 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 330 YRSTASQERDHEHYSPDD 277
YR T SQ R H H++PD+
Sbjct: 336 YRRTRSQLRPHHHFAPDE 353
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 197 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 75
PIP P + T ++K YFTK P MLR F++ + +
Sbjct: 684 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWLQLQR 723
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 108 HGMWNEFCEICAILLQ--PGRRAPRPAASGDWSSVPDELDHGQRLTEDPSCCRSVDLHSR 281
H W+ +L P R A P A+ + +P+ + + ++ + PSC + +
Sbjct: 159 HAPWDVLTRFAEKMLLRFPLREASPPPAAQGFDKIPELISNWSKIFDPPSCGITKEKRFV 218
Query: 282 RGCNVRDRVLGMLWSD 329
G RD+ L SD
Sbjct: 219 HGLFSRDKKDSFLISD 234
>SB_22636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = -3
Query: 453 IHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDY 274
+ + + + +A +++D DH +DD D DDH + + D + + D +
Sbjct: 83 MEHGIPEVMAAADDDD-DHDDDDDDDHDDDHDDDDHDDDHHHHDDDDDDHDDDDHDDDHH 141
Query: 273 ED 268
+D
Sbjct: 142 DD 143
>SB_8348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 294 VRDRVLGMLWSDTRESLHGRHVRNLFAGDHHCAS 395
++D V G W++ + +LH + AGD C+S
Sbjct: 313 IQDEVQGFHWNNAKATLHPFMIYYKLAGDLQCSS 346
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = -3
Query: 546 AFELSLQFRENSLGGLVCVSVRSLFE*HADAIHNALLDALAVGEEEDADHHLHNDDHQQK 367
A E++L+ R + VS L H++ ++ + + + +D H+DD ++
Sbjct: 334 AMEMNLEDRTKGFVISLVVSEDKLPPGHSEDEYDKEHEEASKDDHQDDKEAEHHDDKDEQ 393
Query: 366 DCVRDDHAVTLAYRSTASQERDHEHYSPDDYED 268
+D+H + E +H+ DD+ED
Sbjct: 394 HDDKDEHRDD---KDDHHDEDEHDEKKGDDHED 423
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = -3
Query: 411 EDADHHLHNDDHQQKDCVRDDHAVTLAYRSTASQERDHEH----YSPDDYEDPRT-DSKM 247
+ H H + QQ+ ++ + R + +R+ + SP D+E +
Sbjct: 388 QQQQHQQHEE--QQQRLLKQQEGLCEQIRQLENHQREVQSNLSMLSPRDHELAEIRQHEA 445
Query: 246 GLQ*VFDHGPVHQERYSNPH*QQAEERDDQVEEE*HIFHKTR 121
+ + D +HQ +Y H +Q + DDQ IFH+ R
Sbjct: 446 QIVSLLDEQKMHQRQYEQMHQRQQQRLDDQA----RIFHRDR 483
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 197 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFI 87
PIP P + T ++K YFTK P MLR F++
Sbjct: 86 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWL 121
>SB_43387| Best HMM Match : DUF1103 (HMM E-Value=1.5e-07)
Length = 644
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 411 EDADHHLHNDDHQQKD---CVRDDHAVTLAYRSTASQERDHEHYSPD-DYEDPRTDSK 250
++ DHH+H+ D KD +RD S DH +S D D +D SK
Sbjct: 90 DNKDHHIHSKDPDNKDHHIHIRDTDNKDHHIHSKDPDNMDHHIHSKDPDNKDHHIHSK 147
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = -3
Query: 402 DHHLHNDDHQQKD---CVRDDHAVTLAYRSTASQERDHEHYSPD-DYEDPRTDSK 250
DHH+HN D KD +D S +DH +S D D +D SK
Sbjct: 417 DHHIHNKDRDNKDHHTHSKDPDNKDPHIHSKHPDNKDHHIHSKDPDNKDHHIHSK 471
>SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 228
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/62 (22%), Positives = 22/62 (35%)
Frame = -3
Query: 330 YRSTASQERDHEHYSPDDYEDPRTDSKMGLQ*VFDHGPVHQERYSNPH*QQAEERDDQVE 151
Y RDH H D +D D + DH H + + H + +D +
Sbjct: 68 YHHKKGHHRDHHHKDHKDQKDHAKDQSKDHKDQKDHAKDHSKDHPKDHPKNHPSKDQKGS 127
Query: 150 EE 145
+E
Sbjct: 128 KE 129
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 420 GEEEDADHHLHNDDHQQKDCVRDDHAVTLA 331
G+++DAD NDD + D V DD + LA
Sbjct: 122 GDDDDADDDNGNDDEDKSD-VDDDDVIPLA 150
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 197 PIPTSSRPRSATTRLKKNSTYFTKLVPHPMLRALFFISVSQ 75
PIP P + T ++K YFTK P MLR F+ + +
Sbjct: 82 PIP-GENPDNYKTVIEKFDQYFTKRDPQLMLREKFWFQLQR 121
>SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 379
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/62 (22%), Positives = 22/62 (35%)
Frame = -3
Query: 330 YRSTASQERDHEHYSPDDYEDPRTDSKMGLQ*VFDHGPVHQERYSNPH*QQAEERDDQVE 151
Y RDH H D +D D + DH H + + H + +D +
Sbjct: 9 YHHKKGHHRDHHHKDHKDQKDHAKDQSKDHKDQKDHAKDHSKDHPKDHPKNHPSKDQKGS 68
Query: 150 EE 145
+E
Sbjct: 69 KE 70
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 315 SQERDHEHYSPDDYEDPRTDSKMG--LQ*VFDHGPVHQERYSNPH*QQAEERDDQVEEE 145
S+E D +HY DD D D K+G +Q FD P+ +ER + DD ++E
Sbjct: 218 SEEYD-DHYDGDDNFDNYNDDKVGDEVQDDFD-DPIREEREAQKQYWDDGSHDDGSKDE 274
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,774,494
Number of Sequences: 59808
Number of extensions: 367031
Number of successful extensions: 1388
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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