Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N21
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.83 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.9  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = +3

Query: 477 DSLEEIKKIADNAKKMGLITSLIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 653
           D   +++ + DN  ++  IT  +    R + A  S  + GVG A   +   V G ++ L
Sbjct: 452 DQPYKVRALLDNGSQLNFITERVAQELRLKRARVSEQIAGVGGAIMRVAGSVVGTIRSL 510


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 258  MFSNASETVKKFVSNEEYKLVLVVR---TDLSMGKGKIAAQCCHAAVGAFEKALKKDPEG 428
            +F  A + +  FV N+++  V +       L +  G+I A   +   G   ++   DP+G
Sbjct: 2565 VFVYADDRLVGFVRNDQFYSVWLDHERSVRLVIKNGEIVAAYDYLPYGELLRSYGDDPDG 2624

Query: 429  LKAWQMTGQ 455
               ++ TGQ
Sbjct: 2625 HLDYRFTGQ 2633


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 258  MFSNASETVKKFVSNEEYKLVLVVR---TDLSMGKGKIAAQCCHAAVGAFEKALKKDPEG 428
            +F  A + +  FV N+++  V +       L +  G+I A   +   G   ++   DP+G
Sbjct: 2566 VFVYADDRLVGFVRNDQFYSVWLDHERSVRLVIKNGEIVAAYDYLPYGELLRSYGDDPDG 2625

Query: 429  LKAWQMTGQ 455
               ++ TGQ
Sbjct: 2626 HLDYRFTGQ 2634


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,635
Number of Sequences: 2352
Number of extensions: 14197
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)