Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N21
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006807-1|AAH06807.1|  179|Homo sapiens peptidyl-tRNA hydrolase...   157   5e-38
AL137322-1|CAB70696.1|  176|Homo sapiens hypothetical protein pr...   157   5e-38
AF151905-1|AAD34142.1|  179|Homo sapiens CGI-147 protein protein.     157   5e-38

>BC006807-1|AAH06807.1|  179|Homo sapiens peptidyl-tRNA hydrolase 2
           protein.
          Length = 179

 Score =  157 bits (380), Expect = 5e-38
 Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
 Frame = +3

Query: 198 GLSCGICIGLSI---FAI---RKYMKMFSNASETVKKFVSNEEYKLVLVVRTDLSMGKGK 359
           G++CG+C+G S+   F +    K  K  ++          + EYK++LVVR DL MGKGK
Sbjct: 22  GVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGK 81

Query: 360 IAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKIDSLEEIKKIADNAKKMGLITS 539
           +AAQC HAAV A+++  +++PE LK W+  GQ KV +K    E +  +  +AK +GL  S
Sbjct: 82  VAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVS 141

Query: 540 LIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKL 650
           LI+DAGRTQIAP S TVLG+GP P D+IDKVTGHLKL
Sbjct: 142 LIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178


>AL137322-1|CAB70696.1|  176|Homo sapiens hypothetical protein
           protein.
          Length = 176

 Score =  157 bits (380), Expect = 5e-38
 Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
 Frame = +3

Query: 198 GLSCGICIGLSI---FAI---RKYMKMFSNASETVKKFVSNEEYKLVLVVRTDLSMGKGK 359
           G++CG+C+G S+   F +    K  K  ++          + EYK++LVVR DL MGKGK
Sbjct: 19  GVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGK 78

Query: 360 IAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKIDSLEEIKKIADNAKKMGLITS 539
           +AAQC HAAV A+++  +++PE LK W+  GQ KV +K    E +  +  +AK +GL  S
Sbjct: 79  VAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVS 138

Query: 540 LIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKL 650
           LI+DAGRTQIAP S TVLG+GP P D+IDKVTGHLKL
Sbjct: 139 LIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 175


>AF151905-1|AAD34142.1|  179|Homo sapiens CGI-147 protein protein.
          Length = 179

 Score =  157 bits (380), Expect = 5e-38
 Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
 Frame = +3

Query: 198 GLSCGICIGLSI---FAI---RKYMKMFSNASETVKKFVSNEEYKLVLVVRTDLSMGKGK 359
           G++CG+C+G S+   F +    K  K  ++          + EYK++LVVR DL MGKGK
Sbjct: 22  GVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGK 81

Query: 360 IAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKIDSLEEIKKIADNAKKMGLITS 539
           +AAQC HAAV A+++  +++PE LK W+  GQ KV +K    E +  +  +AK +GL  S
Sbjct: 82  VAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVS 141

Query: 540 LIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKL 650
           LI+DAGRTQIAP S TVLG+GP P D+IDKVTGHLKL
Sbjct: 142 LIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,578,883
Number of Sequences: 237096
Number of extensions: 1805537
Number of successful extensions: 3360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3357
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)