Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N21
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067936-7|AAC19215.1|  316|Caenorhabditis elegans Hypothetical ...    87   1e-17
AC024876-7|AAF60890.4|  211|Caenorhabditis elegans Hypothetical ...    38   0.010
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    32   0.38 
Z81072-3|CAB03022.1|  486|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF067936-7|AAC19215.1|  316|Caenorhabditis elegans Hypothetical
           protein C24G6.8 protein.
          Length = 316

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = +3

Query: 294 VSNEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKD--PEGLKAWQMTGQAKVA 467
           V+   +K+VLV    L MG GKIAAQ  HA +G + +A+  +     + AW   GQ K+ 
Sbjct: 196 VAGRTHKMVLVANMSLKMGTGKIAAQVGHATLGVYRQAMNSENGQNAIAAWTRHGQVKIV 255

Query: 468 LKIDSLEEIKKIADNAKKMGLITSLIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLK 647
           +K  S E++  +   AK  G    L++DAG TQI   S TVLG+    +  +D VTG LK
Sbjct: 256 VKGQSTEQLMDLCKVAKDAGCYYYLVQDAGYTQIPAGSRTVLGIFGTVEQ-VDSVTGGLK 314

Query: 648 LL 653
           LL
Sbjct: 315 LL 316


>AC024876-7|AAF60890.4|  211|Caenorhabditis elegans Hypothetical
           protein Y94H6A.7 protein.
          Length = 211

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
 Frame = +3

Query: 255 KMFSNASETVKKFVSNEEYKLVLVVRTDLS--MG--KGKIAAQCCHAAVGAFEKALKKDP 422
           K F    + +   V+   Y + +++R DL   +G   G +  Q  HAA  A     + DP
Sbjct: 82  KQFDEVLQHIMATVAATSYVMYVILRRDLQTKLGWPLGAVCTQAAHAA-SASMWIFRNDP 140

Query: 423 EGLKAW--QMTGQAKVALKIDSLEEIKKIAD 509
              +A+   +    KV L +DS EEIKK+AD
Sbjct: 141 N-TEAYTSNLDSMHKVTLGVDSEEEIKKVAD 170


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 441 QMTGQAKVALKIDSLEEIKKIADNAKKMGLITSLIRDAGRTQI 569
           Q+  Q K   K+ +  E  K+ +NAKK+G I  ++   G+ Q+
Sbjct: 279 QLPAQLKALEKLMNFSEQLKLPENAKKLGNIIEIVNQDGKNQL 321


>Z81072-3|CAB03022.1|  486|Caenorhabditis elegans Hypothetical
           protein F30A10.4 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 378 DSIELLFCLYPYLGLFGQLEPICTL--HSIQTF*QFHWH*KTSSCTFE 241
           D + ++     YLGL GQ+E  CT+    I T  Q HWH + S   ++
Sbjct: 353 DEMMVMTLFENYLGLDGQMESNCTVAKEDILTR-QTHWHLEQSDGLYQ 399


>Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical
           protein C34C6.6b protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 384 AVGAFEKALKKDPEGLKAWQMTGQAKVALKIDSL 485
           A+ A+E A++KDP+  +AW   G A    + D L
Sbjct: 235 AMLAYEAAVQKDPQDARAWCKLGLAHAENEKDQL 268


>Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical
           protein C34C6.6a protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 384 AVGAFEKALKKDPEGLKAWQMTGQAKVALKIDSL 485
           A+ A+E A++KDP+  +AW   G A    + D L
Sbjct: 237 AMLAYEAAVQKDPQDARAWCKLGLAHAENEKDQL 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,104,302
Number of Sequences: 27780
Number of extensions: 313169
Number of successful extensions: 800
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)