Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N21
         (759 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g16870.1 68418.m01976 expressed protein                            126   1e-29
At3g03010.1 68416.m00296 expressed protein                            120   8e-28
At4g32900.1 68417.m04681 expressed protein                             61   7e-10
At4g32900.2 68417.m04682 expressed protein                             60   2e-09
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi...    33   0.16 
At4g12400.1 68417.m01960 stress-inducible protein, putative simi...    33   0.21 
At3g13330.1 68416.m01678 expressed protein                             30   1.5  
At3g50010.1 68416.m05468 DC1 domain-containing protein contains ...    29   3.4  
At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 fam...    28   5.9  
At3g04560.1 68416.m00484 expressed protein                             28   7.7  

>At5g16870.1 68418.m01976 expressed protein
          Length = 169

 Score =  126 bits (305), Expect = 1e-29
 Identities = 69/168 (41%), Positives = 106/168 (63%), Gaps = 7/168 (4%)
 Frame = +3

Query: 171 MTFDMSFYTGLSCGICIGLS-----IFAIRKYMKMFSNASET-VKKFVSN-EEYKLVLVV 329
           +T+  +   G + G CIG       + A+ K +K  S+ S   ++K     +++K+VLVV
Sbjct: 3   LTWLSALIVGAALGYCIGTRRSKPVVAAVDKDIKTQSSKSPLEIEKLADILDDFKMVLVV 62

Query: 330 RTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKIDSLEEIKKIAD 509
           R DL MGKGKIAAQC HA +G ++K +++ P+ L  W+   Q KV +KI+  +E+ ++ +
Sbjct: 63  RNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVVKIEDEDEMLELQE 122

Query: 510 NAKKMGLITSLIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 653
            AK + L T +  DAGRTQIAPNS TV+ +   P +++D+VTG LKLL
Sbjct: 123 RAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDEVTGGLKLL 169


>At3g03010.1 68416.m00296 expressed protein
          Length = 179

 Score =  120 bits (290), Expect = 8e-28
 Identities = 59/117 (50%), Positives = 82/117 (70%)
 Frame = +3

Query: 303 EEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKIDS 482
           + +K+VLVVR DL MGKGKIAAQC HA +G ++K L++ P+ L  W+   Q KV +KI+S
Sbjct: 64  KNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKVVVKIES 123

Query: 483 LEEIKKIADNAKKMGLITSLIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLKLL 653
            EE+  + + AK + L T +  DAG+TQIAPNS TV+ +   P D +D+VTG LKL+
Sbjct: 124 EEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAI-LGPVDNVDEVTGGLKLM 179


>At4g32900.1 68417.m04681 expressed protein
          Length = 143

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = +3

Query: 300 NEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVALKID 479
           ++E K+VLVVR DL M  GKIA+QC HAA G + + ++ D   L+ W+  GQ K+ +   
Sbjct: 76  DQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCK 135

Query: 480 SLEEIKK 500
           + ++ K+
Sbjct: 136 NSKKCKQ 142


>At4g32900.2 68417.m04682 expressed protein
          Length = 139

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 26/57 (45%), Positives = 38/57 (66%)
 Frame = +3

Query: 300 NEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQMTGQAKVAL 470
           ++E K+VLVVR DL M  GKIA+QC HAA G + + ++ D   L+ W+  GQ K+ +
Sbjct: 76  DQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVV 132


>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515: TPR Domain
          Length = 883

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +3

Query: 381 AAVGAFEKALKKDPEGLKAWQMTGQAKVAL--KIDSLEEIKK 500
           +A+  F KA++ +P   +AW+  GQA+ AL   ++++E++ K
Sbjct: 349 SAIADFTKAIQSNPAASEAWKRRGQARAALGEYVEAVEDLTK 390


>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
           to sti (stress inducible protein) [Glycine max]
           GI:872116; contains Pfam profile PF00515 TPR Domain
          Length = 530

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 22/81 (27%), Positives = 40/81 (49%)
 Frame = +3

Query: 267 NASETVKKFVSNEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKDPEGLKAWQM 446
           N +E VKK +  +EY    +   +   G G    Q    AV  + +A+K++P  ++A+  
Sbjct: 349 NDAEKVKKELEQQEYFDPTIAEEEREKGNGFFKEQKYPEAVKHYSEAIKRNPNDVRAY-- 406

Query: 447 TGQAKVALKIDSLEEIKKIAD 509
           + +A    K+ +L E  K A+
Sbjct: 407 SNRAACYTKLGALPEGLKDAE 427


>At3g13330.1 68416.m01678 expressed protein
          Length = 1711

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/71 (22%), Positives = 36/71 (50%)
 Frame = +3

Query: 138 LKTLKISPKHKMTFDMSFYTGLSCGICIGLSIFAIRKYMKMFSNASETVKKFVSNEEYKL 317
           L   + SP+H M  D+ F+   + G C+G +    +  + + +     ++K  S++   L
Sbjct: 758 LPDFRPSPRHDMVEDLQFFIAGASGSCVGSAEIREKTAITIHAACKYLLEK-KSDDSILL 816

Query: 318 VLVVRTDLSMG 350
           +L++R   ++G
Sbjct: 817 ILIIRIMDALG 827


>At3g50010.1 68416.m05468 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 769

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 90  LCNTPNIFNYLHTFCLLKTLKISP-KHKMTFDMSFYT-GLSCGIC 218
           +C   +   +L    L + +KIS   H++ F  SF   GLSCG+C
Sbjct: 363 MCPPCDFVTHLRCINLPRVIKISRHSHRIYFTSSFEKEGLSCGVC 407


>At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 family
           protein similar to  PHO1 protein [Arabidopsis thaliana]
           GI:20069032; contains Pfam profiles PF03105: SPX domain,
           PF03124: EXS family
          Length = 747

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 135 LLKTLKISPKHKMTFDMSFYTGLSCGICIGLSIF 236
           LL+      KH++TF   F+ G +  + I L +F
Sbjct: 334 LLRPKVTKEKHRITFSTGFFVGCTVSLVIALGLF 367


>At3g04560.1 68416.m00484 expressed protein
          Length = 417

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
 Frame = +3

Query: 348 GKGKIAAQCCHAAVGAFEKALKKDPEGLKAW-QMTGQAKVALKIDSLEEIKKIADN---- 512
           G G+       AA     +A++ DP GL AW   +G+     KI    E     +N    
Sbjct: 249 GDGQTTQDVAEAASAGDNEAVESDPFGLDAWIPSSGKKNGKTKIKRTNEDPDAEENKRFL 308

Query: 513 -AKKMGLITSLIRDAGRTQIAPNSITVLGV 599
            +K+  LIT L   A R    P   TV+ +
Sbjct: 309 RSKREALITCL-EIAARRYKVPWCQTVIDI 337


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,833,158
Number of Sequences: 28952
Number of extensions: 274688
Number of successful extensions: 654
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)