Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N16
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    27   0.62 
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    26   0.82 
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    24   3.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.8  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 253  VVPLACL--YQPLKERPDLPPIQYEPVLCTRNTCRAILNP 366
            +VP+A L     L+ + +LP IQ   +L T +T R  LNP
Sbjct: 1168 IVPMALLRSLDELELQRELPRIQKAVILRTCSTLRRFLNP 1207


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
 Frame = +3

Query: 255 CAFGLLVPTA*GAP-----RPTTDTVRACTL 332
           CA  +L P A GAP     RP  D++R C +
Sbjct: 13  CALAVLSPVAYGAPMDTDDRPVWDSIRLCDI 43


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 224 GHTFQVNRMPSRSSFCW 174
           GHT    R P RS+ CW
Sbjct: 284 GHTSYHCREPDRSNLCW 300


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/58 (20%), Positives = 24/58 (41%)
 Frame = +1

Query: 46   KIDQFLGFLXXXILCFXQFAHVFITGSPYXFLIGDMATYEEFIQQNEDRDGIRFTWNV 219
            K+D  L  L   ++       V +TG+    ++ +    E  I      DG + ++N+
Sbjct: 1396 KVDDMLNVLMVELVNLNNQKRVQLTGAKVHHIMSNWCYAEMTIDTTHTADGSKLSFNI 1453


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,485
Number of Sequences: 2352
Number of extensions: 14182
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)