Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N16
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    24   1.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    24   1.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    24   1.3  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   3.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.4  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 434 GNGFRWKQKLQTHNLAL*STWH--IGFNIALHVFRVQSTGSYCIGGRSGRSLSGWYKQAK 261
           G+ + W   L+ + L     W+  +   I+ H+ +V+   +  +     + +  W K  +
Sbjct: 67  GSNWNWNTLLRPNFL---DGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNKIPE 123

Query: 260 GTTSLVASILLDGHTFQVN 204
           G  +   + ++DGH   +N
Sbjct: 124 GANTTSTTKIIDGHVVTIN 142


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 434 GNGFRWKQKLQTHNLAL*STWH--IGFNIALHVFRVQSTGSYCIGGRSGRSLSGWYKQAK 261
           G+ + W   L+ + L     W+  +   I+ H+ +V+   +  +     + +  W K  +
Sbjct: 67  GSNWNWNTLLRPNFL---DGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNKIPE 123

Query: 260 GTTSLVASILLDGHTFQVN 204
           G  +   + ++DGH   +N
Sbjct: 124 GANTTSTTKIIDGHVVTIN 142


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 434 GNGFRWKQKLQTHNLAL*STWH--IGFNIALHVFRVQSTGSYCIGGRSGRSLSGWYKQAK 261
           G+ + W   L+ + L     W+  +   I+ H+ +V+   +  +     + +  W K  +
Sbjct: 67  GSNWNWNTLLRPNFL---DGWYQTLQSAISAHMKKVREQMAGILSRIPEQGVVNWNKIPE 123

Query: 260 GTTSLVASILLDGHTFQVN 204
           G  +   + ++DGH   +N
Sbjct: 124 GANTTSTTKIIDGHVVAIN 142


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/77 (18%), Positives = 33/77 (42%)
 Frame = -1

Query: 434 GNGFRWKQKLQTHNLAL*STWHIGFNIALHVFRVQSTGSYCIGGRSGRSLSGWYKQAKGT 255
           G+ + W   L+ + L     W+    +  H+ +V+   +  +     + +  W K  +G 
Sbjct: 23  GSNWNWNTLLRPNFL---DGWYQ--TLQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGA 77

Query: 254 TSLVASILLDGHTFQVN 204
            +   + ++DGH   +N
Sbjct: 78  NTTSTTKIIDGHVVTIN 94


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +1

Query: 271 LYQPLKERPDLPPIQYEPVLCTRNTCRAILNPM 369
           L +P  + PD  P     +      C ++LNP+
Sbjct: 393 LVRPFLKNPDAIPAFLSSLFLWLGYCNSLLNPI 425


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 460  QHQPAELIPNFSTIEYTITRAQAMPP 537
            +H  + +  ++ST+E T  R Q  PP
Sbjct: 1332 EHIYSSIDSDYSTLERTAWRQQQPPP 1357


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 350 LHVFRVQSTGSYCIGGRSGRSLSGWYKQAKGTTSLVAS 237
           +HV + +ST   C+          WY Q      LV S
Sbjct: 247 VHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVLS 284


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 350 LHVFRVQSTGSYCIGGRSGRSLSGWYKQAKGTTSLVAS 237
           +HV + +ST   C+          WY Q      LV S
Sbjct: 247 VHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVLS 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,714
Number of Sequences: 438
Number of extensions: 3779
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)