Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N15
(579 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 129 1e-30
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 128 3e-30
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 126 2e-29
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 30 1.2
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 30 1.5
10_01_0131 - 1541964-1542161,1542235-1542390,1543046-1543923,154... 29 2.0
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 29 2.0
08_02_0802 + 21386248-21387468 29 2.7
07_03_1296 + 25583195-25584385 29 2.7
01_05_0305 + 20659199-20660026,20660147-20660179 29 2.7
03_06_0519 - 34481751-34482722 29 3.5
02_05_0460 - 29224525-29224620,29225525-29226625 28 4.7
12_02_0020 - 12388777-12389062,12389637-12389818 28 6.2
03_05_0528 - 25268396-25269217 28 6.2
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 28 6.2
11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195 27 8.2
08_02_0955 + 22994266-22995630 27 8.2
05_05_0385 + 24566916-24567503,24568609-24568824,24568916-245692... 27 8.2
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 27 8.2
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 129 bits (312), Expect = 1e-30
Identities = 74/165 (44%), Positives = 98/165 (59%), Gaps = 7/165 (4%)
Frame = +3
Query: 48 LLLPKQNRVALSASLFXXGVMVAKKASHAPKHTELAXLPNLQVIKAMQSLKSRGYVKEQF 227
+++PK+NR + LF GV+ AKK + KH ++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQI-DVPNLQVIKLMQSFKSKEYVRETF 59
Query: 228 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAE 398
+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R
Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119
Query: 399 DRSAYRRTPAAPGVAPHDKKADVG--PGSADLEFKGGY--GRGRP 521
DR + G P D G G A EF+ + GRP
Sbjct: 120 DRPRFGDRDGYRG-GPRGAPGDFGGEKGGAPAEFQPSFRSSGGRP 163
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 128 bits (309), Expect = 3e-30
Identities = 71/158 (44%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Frame = +3
Query: 48 LLLPKQNRVALSASLFXXGVMVAKKASHAPKHTELAXLPNLQVIKAMQSLKSRGYVKEQF 227
+++PK+NR + LF GV+ AKK + KH ++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQI-DVPNLQVIKLMQSFKSKEYVRETF 59
Query: 228 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAE 398
+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R
Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119
Query: 399 DRSAYRRTPAAPGVAPHDKKADVG--PGSADLEFKGGY 506
DR + G P D G G A EF+ +
Sbjct: 120 DRPRFGDRDGYRG-GPRGAPGDFGGEKGGAPAEFQPSF 156
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 126 bits (303), Expect = 2e-29
Identities = 69/163 (42%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Frame = +3
Query: 48 LLLPKQNRVALSASLFXXGVMVAKKASHAPKHTELAXLPNLQVIKAMQSLKSRGYVKEQF 227
+++ K+NR + LF GV+ AKK + KH ++ +PNL+VIK MQS KS+ YV+E F
Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKV-DVPNLEVIKLMQSFKSKEYVRETF 59
Query: 228 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGPVG-RPDAPARSAE 398
+W+H+YWYLTN+GIE+LR +L+LP E+VP TLK+S + + GP G RP P R
Sbjct: 60 SWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEG 119
Query: 399 DRSAYRRTPAAPGVAPHDKKADVG--PGSADLEFKGGYGRGRP 521
DR + G P D G G A EF+ + RP
Sbjct: 120 DRPRFGDRDGYRG-GPRGAPGDFGGEKGGAPAEFQPSFRGSRP 161
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = +3
Query: 177 IKAMQSLKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTET 347
I + L S G WR F+ YLT E I YL +HL + +T RS+ +
Sbjct: 605 ISSNAQLDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDE 661
Query: 348 VRRGP-----VGRPDAPARSAED 401
R+ + +P PA S +D
Sbjct: 662 SRKYKGSLEYISQPSTPAGSNKD 684
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 384 ARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRG 515
AR RS+ RR+P+ G A + G ++ L++ GG G G
Sbjct: 58 ARGKRSRSSRRRSPSGSGSAATKGRWARGSPASPLDYSGGSGSG 101
>10_01_0131 -
1541964-1542161,1542235-1542390,1543046-1543923,
1544060-1544135,1544162-1544191
Length = 445
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Frame = +3
Query: 111 VAKKASHAPKHTELAXLPNLQVIKAMQSLKSRGYVKE---QFAWRHFYWYLTNEGIEYLR 281
V + +HAP L+ LP+ + + M L +R V+ WRH + L +Y
Sbjct: 53 VMMEPAHAPGRDRLSALPDNVLRRIMSFLNARQSVQTCVLSRRWRHLWRSLPRINADYTE 112
Query: 282 I-FLHL---PPEIVPATLKRSVRTETVRRGPV 365
F L ++ A K+ V T +RR PV
Sbjct: 113 FCFACLDEKKEKVQEARFKKFVSTLLLRRDPV 144
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +3
Query: 390 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRP 521
SA RS R TP P + PH K+A P S L G G P
Sbjct: 3 SAAPRS--RLTPPTPAMHPHRKRARSPPASGSLVRCSSSGNGAP 44
>08_02_0802 + 21386248-21387468
Length = 406
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -3
Query: 484 SAEPGPTSAFLS*GATPGAAGVRLYADLSSAE-RAGASGRPTGPRRTVSVRTERLSVAGT 308
S P P+S F G V DLS A R + RP GPR + R E +++
Sbjct: 123 SGSPEPSSGFFVAVVVDGEM-VLAAGDLSDAAYRRTRARRPAGPRPVLLSRREHVAMRDA 181
Query: 307 ISGGR 293
GGR
Sbjct: 182 GRGGR 186
>07_03_1296 + 25583195-25584385
Length = 396
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +3
Query: 288 LHLPPEIVPATLKRSVR--TETVRRGPVGRPDAPARSAEDRSAYRRTPA---APGVAPHD 452
LHL P PA +KRS R + + P DA R ++ A+ + AP +AP
Sbjct: 76 LHLQPNPDPAEVKRSYRRLSNLLSSNPRPGADAALRCVQEAFAHLSDSSANPAPALAPPP 135
Query: 453 KKADVGPGSA 482
A G SA
Sbjct: 136 APASGGDASA 145
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +3
Query: 288 LHLPPEI-----VPATLKRSVRTETVRRGPVG--RPDAPARSAEDRSAYRRTPAAPGVA 443
L LPP + A S+ TV GP G +P P + +++RR P+A GV+
Sbjct: 122 LKLPPRLQAAAAAAAAADSSLSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVGVS 180
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 351 RRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRPAS 527
R+G G PA S+ + RR+ G AP D A+ GP S + PA+
Sbjct: 23 RKGKRGAEAPPATSSSTPTTARRSKRLAG-APPDHPAEAGPSSTNARRSSRLAGAPPAT 80
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 360 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 482
PV APA AE S R P P PH A V SA
Sbjct: 270 PVSPASAPAALAESSSEELRPPPLPSSHPHAHAAAVVAASA 310
>12_02_0020 - 12388777-12389062,12389637-12389818
Length = 155
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 363 VGRPDAPARSAEDRSAYRRTPAAP 434
+GRP R E+RS +RTP+ P
Sbjct: 47 IGRPKGEGREWEERSRSQRTPSPP 70
>03_05_0528 - 25268396-25269217
Length = 273
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 471 PGSADLEFKGGYGRG 515
PGS +LE GGYG G
Sbjct: 106 PGSTELEINGGYGEG 120
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 336 RTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAP--HDKKADVGPGSADLEFKGGYG 509
R + PV APA + +AY PAAP VAP D G G GG+G
Sbjct: 17 RRSDLAGAPVLAASAPAAANPYAAAYAPAPAAP-VAPAGGDFSRFGGRGRGGGAGGGGWG 75
Query: 510 RG 515
RG
Sbjct: 76 RG 77
>11_02_0010 + 7322826-7323658,7324236-7324714,7325204-7326195
Length = 767
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 181 LITWRLGSXASSVCFGA*EAFLATMTPXXKRDAER--ATRFCLGSNRLESRLE 29
+ T R+ S A S C + E F+ M P K D+E TR + S+LE
Sbjct: 309 ITTTRIKSVAQSCCGASDEGFVYQMKPLNKSDSENLFLTRTFGAEKKCPSQLE 361
>08_02_0955 + 22994266-22995630
Length = 454
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -3
Query: 490 SRSAEPGPTSAFLS*GATPGAAGVRLYADLSSAERAGASGRPTGPRRT 347
SRS P +A LS +TP +A V A S A A R PRR+
Sbjct: 45 SRSKTPPHNAAVLS--STPASAAVDFVAASDSDAGADADARLASPRRS 90
>05_05_0385 +
24566916-24567503,24568609-24568824,24568916-24569241,
24569906-24570338,24570769-24571281
Length = 691
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 168 G*EAXLVQYASVHERLFWPP*XPXXRGTQKEQHGF-VWAATDLKAAWRRTEQQE 10
G EA V+Y + H R + R + HG+ WAA ++ AWRR + ++
Sbjct: 596 GLEAGDVKYVTQHFRYTFTS-DKVRRSARYYSHGWRTWAAVAVQLAWRRYKHRK 648
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 33 RRLSSLLLP-KQNRVAL-SASLFXXGVMVAKKASHAPKHTELAXLPNLQVIKAMQSLKSR 206
R L+ LL+ +++RVA SAS + + K P H N Q+ KA + L S
Sbjct: 564 RELTDLLMEAERSRVARRSASAWEEDADI-KALEPLPLHHRHMATANQQLQKAAKLLDSG 622
Query: 207 GYVKEQFAWRHFYWYLTNEGIEYLRIFLHL 296
+F WRH + + + +F+HL
Sbjct: 623 AVRATRFLWRH---PVARVSLLFYLVFVHL 649
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,019
Number of Sequences: 37544
Number of extensions: 274894
Number of successful extensions: 1017
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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