Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N13
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    36   3e-04
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   1.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.3  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 24/85 (28%), Positives = 38/85 (44%)
 Frame = +3

Query: 468 LRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGA 647
           ++ H F  +  L +I + + +I  L    F  L+ LK L ++        NK        
Sbjct: 107 VQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKG-------NKIATIAYET 159

Query: 648 FNGLRXLHTLDLAYNNIXKIPSDLF 722
           F  L  L  LDLAYN+I  +  ++F
Sbjct: 160 FQNLPELEDLDLAYNSISSLDFNIF 184



 Score = 31.1 bits (67), Expect = 0.010
 Identities = 23/74 (31%), Positives = 40/74 (54%)
 Frame = +3

Query: 501 LAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLD 680
           L ++ + + K+L    ++F  +  L+ L + S N+ +    ELDF    F   + L  LD
Sbjct: 250 LMQLYLGHNKLLNATKDLFGNMPHLQVLDL-SHNSLY----ELDFD--TFRNTKKLQWLD 302

Query: 681 LAYNNIXKIPSDLF 722
            ++N I +IP+DLF
Sbjct: 303 TSHNRISEIPNDLF 316



 Score = 27.9 bits (59), Expect = 0.089
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
 Frame = +3

Query: 405 MHSDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSL 584
           M+    +RL ++ +++   +T+    F  +  L ++ +    I  L  N+F+ +  L   
Sbjct: 137 MNLKSLKRLNLKGNKI---ATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMF 193

Query: 585 KIRSMNNEW-------GINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPSDLF 722
            +   +N+         +  E D  LG   GL+ +  LDL++NNI  +    F
Sbjct: 194 HVNMSHNKLINLVVAPSVPFEQDTGLG---GLQNIKVLDLSFNNITSVAKQFF 243


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = +3

Query: 564 LRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYN 692
           ++G  +L    +N    + +E++  + A NG   +HTL + ++
Sbjct: 235 IQGKSALSYERLNEFMRLVEEIEDVIEAINGFYGVHTLLILFS 277


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 301 KHRTMQMRVFVWQVWTVWWSAMYGRC 378
           K RT++M + +  V+ V W+  Y  C
Sbjct: 270 KVRTLKMTIIIVLVFFVCWTPYYVMC 295


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 301 KHRTMQMRVFVWQVWTVWWSAMYGRC 378
           K RT++M + +  V+ V W+  Y  C
Sbjct: 270 KVRTLKMTIIIVLVFFVCWTPYYVMC 295


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +1

Query: 79  LYSLLTFIIVVIATFPHRARTFYSTNMKEYRQPSRLSFKITLF*QVTKMKW 231
           L+ L   +  +IA +    +T     +K  R+   +SF+  +F ++ KMK+
Sbjct: 120 LFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRKEEYISFESKVFHKLKKMKY 170


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 454 RSWLQRIVSRSVPSECIEPT 395
           R  + R+  RS+ +EC EPT
Sbjct: 74  RRIVARVQCRSIKNECPEPT 93


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 278 KTKEYCVYYH 249
           KTK YC YY+
Sbjct: 109 KTKRYCYYYY 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,297
Number of Sequences: 336
Number of extensions: 4122
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)