Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N13
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 38 0.008
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 32 0.54
03_06_0203 - 32337928-32338025,32338745-32338820,32338905-323389... 31 0.71
02_01_0211 - 1406098-1406227,1406581-1406714,1407241-1407380,140... 31 0.94
08_02_0718 + 20382323-20385046 31 1.2
02_02_0432 - 10165098-10165310,10165431-10165622 31 1.2
11_01_0692 - 5700394-5700474,5700546-5702675,5705033-5706169,570... 30 1.6
08_01_0628 - 5460030-5462960 30 1.6
05_03_0162 - 9050981-9051003,9051141-9052273,9052388-9053310,905... 30 1.6
01_07_0256 - 42328795-42329172,42330245-42330379,42330783-423310... 29 2.9
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 29 3.8
11_04_0071 - 13165019-13165082,13165345-13165428,13166325-131665... 29 3.8
03_05_0743 - 27317823-27317969,27318027-27319997,27320335-27321435 29 3.8
03_02_0992 + 13049871-13050449 29 3.8
01_06_1806 + 40012952-40016836 29 3.8
01_05_0608 - 23628100-23631486 29 3.8
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 29 5.0
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 29 5.0
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 29 5.0
08_02_0492 + 17758827-17759763,17759906-17759910 28 6.6
06_03_0587 + 22555414-22557231 28 6.6
03_01_0259 - 1996427-1998772 28 6.6
02_05_0029 - 25194827-25195095,25195129-25197970 28 6.6
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 28 8.7
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602... 28 8.7
07_03_0768 + 21368058-21368624 28 8.7
07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051 28 8.7
04_04_1550 - 34332948-34335986 28 8.7
04_04_1373 + 33025059-33025422,33025510-33025551,33025836-330260... 28 8.7
04_04_0967 + 29782460-29783725 28 8.7
02_04_0595 - 24186714-24186898,24187004-24187150,24187647-241877... 28 8.7
>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
Length = 1125
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRX 665
G+++ L + ++N +I LP + E LK L+ ++N W I+ EL +G L+
Sbjct: 744 GELKQLRTLDVRNTRISELPSQIGE----LKHLRTLDVSNMWNIS-ELPSQIGE---LKH 795
Query: 666 LHTLDLAYNNIXKIPSDL 719
L TLD+ ++ ++PS +
Sbjct: 796 LQTLDVRNTSVRELPSQI 813
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -3
Query: 466 VLSNRSWLQRIVSRSVPSECIEPTT---SLSDDNVRTLHSTIPSTLATRKH 323
VLS R+ I S S PS C++P T SL+D+ + L T S + +H
Sbjct: 252 VLSGRNESYDIASHSGPSLCLDPATARSSLADEKINELLQTCASRWLSGRH 302
>03_06_0203 -
32337928-32338025,32338745-32338820,32338905-32338971,
32339181-32339275,32340062-32340151,32340293-32340340,
32340764-32341069
Length = 259
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Frame = -1
Query: 399 RRHLCPTTTSV------HCTPPYRPHLPHENTHLHRPVLP*APRPSQNKRI 265
RR LCP S TPP P P RP LP PRP K +
Sbjct: 44 RRELCPRLVSSPAKLTDDATPPQPPPQPQPGDRRRRPRLPDPPRPHGGKAV 94
>02_01_0211 -
1406098-1406227,1406581-1406714,1407241-1407380,
1407639-1407829,1408853-1409346
Length = 362
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 360 TPPYRPHLPHENTHLHRPVLP*APRPSQNKRILCLL 253
T P HL H + H P+LP PRP R+ L+
Sbjct: 9 TTPAAAHLHHHHRHHRLPLLPSQPRPRPTLRLRLLI 44
>08_02_0718 + 20382323-20385046
Length = 907
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 492 MQGLAEISIQNC-KILRLPGNVFEGLRGLKSLKIRSM 599
M GL +ISI++C K+L +P + EGL LK L + +M
Sbjct: 834 MPGLQKISIRSCDKLLTIPHGI-EGLENLKELYLFAM 869
>02_02_0432 - 10165098-10165310,10165431-10165622
Length = 134
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -1
Query: 576 SDLASPRRRCPEVAISCNFESISPLDLASFQNDDP*GCSRTGAGYSG 436
S L P C + + C+ S S LA DD C R G SG
Sbjct: 14 SGLCQPGVGCTTIGVGCSMASGSTTGLAGLAFDDAGRCDRNSLGRSG 60
>11_01_0692 -
5700394-5700474,5700546-5702675,5705033-5706169,
5709679-5709975
Length = 1214
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 339 SVDGMVECNVRTLSSDRDVVGSMHSDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEISI 518
++ G C L+ + S+ T+ +R + E+ LRD F + + + +
Sbjct: 516 NITGRCRCRFALLNDCTKPLNSLTHSPTQVRAVRYLENE-ENVLRDASFSSAKYMRVLDL 574
Query: 519 QNCKILRLPGNV--FEGLRGLKSLKIR 593
C I +LP ++ + LR LK+L I+
Sbjct: 575 SGCSIQKLPDSIGHLKQLRYLKALGIK 601
>08_01_0628 - 5460030-5462960
Length = 976
Score = 30.3 bits (65), Expect = 1.6
Identities = 37/118 (31%), Positives = 52/118 (44%)
Frame = +3
Query: 366 VRTLSSDRDVVGSMHSDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEISIQNCKILRLP 545
VR L+ DR S S ++ S F S L + L +++ +I +LP
Sbjct: 574 VRHLALDR-CTSSRRSASAAKIAALRSFQAFGSKLDASLMSCFRLLTVLNLWFIEINKLP 632
Query: 546 GNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPSDL 719
V LR L+ L IRS E EL LG L+ L TLD ++ + K+PS L
Sbjct: 633 STV-TNLRNLRYLGIRSTFIE-----ELPKDLGK---LQKLQTLDTKWSMVQKLPSSL 681
>05_03_0162 -
9050981-9051003,9051141-9052273,9052388-9053310,
9053560-9054615
Length = 1044
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 492 MQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSM 599
M L E+ I+NCK+ RLP + L SL +R++
Sbjct: 857 MPALEELVIENCKLRRLPPGLSSQATALTSLYLRNI 892
>01_07_0256 -
42328795-42329172,42330245-42330379,42330783-42331033,
42331290-42331341,42331619-42331647,42331812-42332105,
42332229-42332378,42333915-42334405,42334513-42334613,
42334941-42335037,42335882-42335950,42336036-42336122,
42336423-42336494,42336795-42336863,42337784-42337858,
42338230-42338301,42338378-42338449,42338533-42338676,
42339106-42339177,42339294-42339365,42339804-42339954,
42340204-42340297
Length = 1008
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 429 LTIRCSQLLFESTLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNE 608
L I+ F T +G + L ++S++NC L G V + + G+ L +++
Sbjct: 224 LIIQLDNNNFSGTSIPSSYGNITTLLKLSLRNCS---LEGPVPD-VSGIPQLGYLDLSHN 279
Query: 609 WGINKELDFTLGAFNGLRXLHTLDLAYNNI-XKIPSDLF 722
+N + G+F+GL L L L NN+ +PSD++
Sbjct: 280 L-LNGSIP---GSFSGLPNLQRLSLDNNNLDGSVPSDVW 314
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 29.1 bits (62), Expect = 3.8
Identities = 29/86 (33%), Positives = 44/86 (51%)
Frame = +3
Query: 462 STLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTL 641
STL D +M L +S++ +I LP + E LR LK+L + + GI EL +
Sbjct: 445 STLDD--ICRMILLQYLSLKKTRITVLPPQI-ENLRCLKTLAV----TQTGI-AELPLQI 496
Query: 642 GAFNGLRXLHTLDLAYNNIXKIPSDL 719
G L L TLD+ + + +IP +L
Sbjct: 497 GK---LPDLETLDVRHTQVKEIPKEL 519
>11_04_0071 -
13165019-13165082,13165345-13165428,13166325-13166524,
13166756-13170655
Length = 1415
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 546 GNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPS 713
G + + G+ LK E+ + K DF +G NGLR L LA N+ I S
Sbjct: 700 GELHALIAGVGRLKFLQELKEFRVGKTTDFQIGQLNGLRELGG-SLAIYNLENICS 754
>03_05_0743 - 27317823-27317969,27318027-27319997,27320335-27321435
Length = 1072
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 474 DHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSL 584
D H M L ++++N K+ RLP + R LK+L
Sbjct: 910 DEHVQAMPALESLTVENSKLNRLPPGLVYHTRALKAL 946
>03_02_0992 + 13049871-13050449
Length = 192
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 426 APCHPSASNRRHLCPTTTSVHCTPP 352
AP HP+ LC T+TS H PP
Sbjct: 144 APPHPARERGNRLCTTSTSHHRHPP 168
>01_06_1806 + 40012952-40016836
Length = 1294
Score = 29.1 bits (62), Expect = 3.8
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILR--LPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGL 659
GK+ L + I N +L +P +V + LR L +L +R N GI L FN
Sbjct: 539 GKLSVLQRLHIDN-NLLEGPIPQSVGD-LRNLTNLSLRG-NRLSGI-----IPLALFN-C 589
Query: 660 RXLHTLDLAYNNI-XKIPS 713
R L TLDL+YNN+ IPS
Sbjct: 590 RKLATLDLSYNNLTGNIPS 608
>01_05_0608 - 23628100-23631486
Length = 1128
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 444 SQLLFESTLRDHHFGKMQGLAEISIQNCKILRLPGNVFEG 563
SQLLF + FG + + N +ILRL N+F G
Sbjct: 823 SQLLFLDLSHNRFFGSLPKWLPERMPNLQILRLRSNIFHG 862
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 426 APCHPSASNR---RHLCPTTTSVHCTPPYRPHLPHENTHLHRPVLP*APR 286
AP H S +N+ H T+ + TPP LP N R +LP AP+
Sbjct: 810 APSHQSKANQIMPPHAADTSRGLLPTPPALARLPTFNNAPAREMLPPAPK 859
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 366 HCTPPYRPHLPHENTHLHRPVLP*APRP 283
H PP+ PH PH H P P P P
Sbjct: 47 HHHPPHHPHPPHHPHPPHHPHPPHHPHP 74
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 366 HCTPPYRPHLPHENTHLH 313
H PP+ PH PH + H H
Sbjct: 65 HPHPPHHPHPPHHHPHPH 82
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +3
Query: 513 SIQNCKILRLPGNVFEG--LRGLKSL-KIRSMNNEWGINKELDFTLGA--FNGLRXLHTL 677
S+ N LRL GN F+G R L +L K+RS N + +L + F+ L+ L
Sbjct: 219 SLTNLTQLRLQGNSFQGPIPRSLYNLVKLRSFVLR---NSRISDSLASVDFSKFGSLNLL 275
Query: 678 DLAYNNI-XKIPSDL 719
DL++NNI +IP +
Sbjct: 276 DLSFNNITGQIPPSI 290
>08_02_0492 + 17758827-17759763,17759906-17759910
Length = 313
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2
Query: 293 AYGSTGRCRCVFSCGKCGRYGGVQCTDVVVGQRCR 397
A S CR V S + G YG V DVVVG RCR
Sbjct: 264 APASAAECRSVHSFYE-GYYGDVS-DDVVVGYRCR 296
>06_03_0587 + 22555414-22557231
Length = 605
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRX 665
G++ ++ N + L LP N F G L + + N + F L+
Sbjct: 356 GRLPSNIGYTLPNIQQLILPNNKFSGSIPSSLLNASHLQRLFLTNNSFTGHIPFFGSLQN 415
Query: 666 LHTLDLAYN 692
L LD+AYN
Sbjct: 416 LEILDMAYN 424
>03_01_0259 - 1996427-1998772
Length = 781
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 177 VATLIQDNFVLTSNENEMDTVLIKMIINTI--FFCFVMGAALTEAPDDADACFRVASVDG 350
V T + D + +V M + T+ + C + G AL E PD+A CF +G
Sbjct: 246 VGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEG 305
Query: 351 M 353
+
Sbjct: 306 L 306
>02_05_0029 - 25194827-25195095,25195129-25197970
Length = 1036
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 540 LPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNI-XKIPSD 716
L G + G LK+L + ++N N +G+ L +LDL++NN+ IPS
Sbjct: 563 LIGPILPGFGNLKNLHVLDLSN----NHISGMIPDELSGMSSLESLDLSHNNLTGSIPSS 618
Query: 717 L 719
L
Sbjct: 619 L 619
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 174 AVATLIQDNFVLTSNENEMDTV--LIKMIINT 263
A+ L DNFV++S+EN+M+T+ + II+T
Sbjct: 220 AIDLLGADNFVVSSDENQMETLKSSLNFIIDT 251
>08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,
6027187-6027258,6027354-6027425,6027784-6027855,
6027980-6028051,6028134-6028205,6028483-6028554,
6028791-6028865,6028970-6029041,6029134-6029199,
6029267-6029332,6029409-6029453,6029542-6029606,
6029697-6030076,6030455-6030653,6030725-6030883,
6030966-6031084,6031156-6031200,6031226-6031791,
6031871-6032021,6032117-6032454,6033702-6033765,
6034329-6034370,6035572-6035575,6035853-6036039,
6037252-6037323,6037687-6037758,6037867-6037938,
6038019-6038090,6038651-6038725,6038815-6038886,
6038988-6039053,6039163-6039228,6039348-6039392,
6039469-6039533,6039615-6039994,6040070-6040202,
6040354-6040512,6040599-6040717,6040805-6041015,
6041155-6041386,6041469-6041619,6041725-6042084
Length = 1952
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 HFGKMQGLAEISIQNCKILRLPGNV-FEGLRGLKSLKIRSMNNEWG 614
+FG L ++ ++NCKI G V F L GL L + S NN G
Sbjct: 1232 YFGSFPNLQDLILRNCKISDNLGTVNFSKLAGLTLLDL-SFNNITG 1276
>07_03_0768 + 21368058-21368624
Length = 188
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 473 PEGALEQELATADCKPLRAIRVHRTDDISVR-RQRP 369
P+GA+E DC RA+ VH+ ++ V R+RP
Sbjct: 108 PDGAMEIAEVCDDCACARAMEVHQQEEYVVAGRRRP 143
>07_03_0129 + 13987100-13987572,13988128-13988321,13988474-13989051
Length = 414
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 266 YCVYYHFNKNCVHFIFVTCQNKVI 195
Y VY+H + C+ FI +T Q K I
Sbjct: 350 YKVYHHHHHRCILFILMTKQKKCI 373
>04_04_1550 - 34332948-34335986
Length = 1012
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 618 NKELDFTLGAFNGLRXLHTLDLAYNNI-XKIPSDL 719
NK + L AF L LH LDL++NN IP +L
Sbjct: 536 NKLVGPILPAFGRLVKLHVLDLSFNNFSGPIPDEL 570
>04_04_1373 +
33025059-33025422,33025510-33025551,33025836-33026054,
33026145-33026384,33026483-33027508,33027770-33028545
Length = 888
Score = 27.9 bits (59), Expect = 8.7
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = +3
Query: 474 DHHFGKMQG---LAEISIQNCKILRLPGNVFEGLRGLK------SLKIRSMNNEWGINKE 626
D F K G + S+ + K+L L GN FEG + SL++ ++NN +N
Sbjct: 225 DWSFNKFHGGLPASLFSLPHLKVLDLSGNFFEGGIPINSSSFPVSLEVLNLNNN-NMNGT 283
Query: 627 LDFTLGAFNGLRXLHTLDLAYNNI-XKIPSDLF 722
L T A L L L L+ N IP LF
Sbjct: 284 LP-TEQAIENLGNLRELHLSLNRFAGNIPRSLF 315
>04_04_0967 + 29782460-29783725
Length = 421
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 469 RVLSNRSWLQRIVSRSVPSECIEP-TTSLSDDNVRTLHSTIPSTLA 335
RV+S SWL R S S PS P TTS S + +PS LA
Sbjct: 67 RVIS--SWLDRASSSSSPSTAGSPATTSSSSSSNAMERERLPSVLA 110
>02_04_0595 -
24186714-24186898,24187004-24187150,24187647-24187718,
24188061-24188204,24188769-24188840,24189233-24189304,
24189805-24189876,24190214-24190285,24190416-24190487,
24190685-24190756,24190957-24191031,24191226-24191372,
24191670-24191877,24192240-24192368,24192454-24192663
Length = 582
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 492 MQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLH 671
++GL++++ N + + E + GL SL + +++ GI E F GL+ L
Sbjct: 279 LRGLSKLTQLNLEGCPVTAACLEAISGLASLVVLNLSR-CGIYGE---GCENFQGLKKLK 334
Query: 672 TLDLAYNNI 698
L+L +NNI
Sbjct: 335 VLNLGFNNI 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,799,152
Number of Sequences: 37544
Number of extensions: 465866
Number of successful extensions: 1752
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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