Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N13
(729 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 37 0.015
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 33 0.18
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 30 2.2
SB_22565| Best HMM Match : EGF (HMM E-Value=0.2) 30 2.2
SB_42531| Best HMM Match : DoxX (HMM E-Value=2) 29 3.9
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 29 3.9
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 29 3.9
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 29 3.9
SB_32303| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_27056| Best HMM Match : DUF615 (HMM E-Value=2.4) 29 3.9
SB_24051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_50632| Best HMM Match : ShTK (HMM E-Value=0.0091) 28 6.7
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 28 6.7
SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_5424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047) 28 6.7
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.7
SB_43726| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-31) 28 8.9
SB_53342| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 28 8.9
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 28 8.9
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +3
Query: 468 LRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGA 647
L++ F Q L + + N I + FE LR LK L + G NK +
Sbjct: 84 LKNTSFQDYQYLKWLDLSNNDISDIQDGTFENLRYLKQLNL-------GENKIRTVSASM 136
Query: 648 FNGLRXLHTLDLAYNNIXKIPSDLF 722
F GL L LDL +N++ +P +F
Sbjct: 137 FKGLVSLEKLDLRFNDLKALPRGVF 161
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 483 FGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLR 662
F + L ++ ++ + LP VF+ L+ L+ L + N +E GAFNGL
Sbjct: 137 FKGLVSLEKLDLRFNDLKALPRGVFKPLKSLRELFLHDNRNMGSRIEE-----GAFNGLD 191
Query: 663 XLHTLDLAYNNIXKIPSDLF 722
L L ++ + KI F
Sbjct: 192 NLRKLHVSATGMKKITQGTF 211
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 35.9 bits (79), Expect = 0.034
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +3
Query: 417 GTERLTIRCSQLLFESTLRDHHFGK---MQGLAEISIQNCKILRLPGNVFEGLRGLKSLK 587
G R+ I C L +S H + MQ ++ +S+ N I + N F L L+SL
Sbjct: 40 GEHRVDIYCGYLADDSFSGLRHVPRNFPMQ-VSLLSLYNNLISTIHSNAFRNLTALRSLN 98
Query: 588 IRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPSDLF 722
+ G N+ F L L +LDL+ N + +P D F
Sbjct: 99 L-------GANRLSVLPRSVFRDLASLRSLDLSANRLSSLPEDTF 136
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Frame = +3
Query: 462 STLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTL 641
S+L + F + L ++ + ++ +P F GL L+ L++ + N + + L TL
Sbjct: 129 SSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSERTLQGTL 188
Query: 642 -----------------GAFNGLRXLHTLDLAYNNIXKIPSDLF 722
G F LR L L L NNI ++ LF
Sbjct: 189 SLKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITELDQRLF 232
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 468 LRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGA 647
L +H K++GL + QN + L L N + GL SL + N ++ + +
Sbjct: 41 LHSNHISKIEGLQHL--QNLRHLDLSSNQISHIEGLTSLGYLRVLN---LSCNRIYLVEG 95
Query: 648 FNGLRXLHTLDLAYNNIXKI 707
LR L LDL+YN I +
Sbjct: 96 LENLRKLTKLDLSYNFIENV 115
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/118 (26%), Positives = 57/118 (48%)
Frame = +3
Query: 366 VRTLSSDRDVVGSMHSDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEISIQNCKILRLP 545
+ L + V GS +L ++ +QL T FG L E+++ +I +LP
Sbjct: 686 INALRKMKGVSGSNSLTFKSKLNVKDNQL----TSLPLDFGSWISLVELNVATNQISKLP 741
Query: 546 GNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPSDL 719
E ++ L +L++ ++N + K+L +GA LR L LD+ N + IP+++
Sbjct: 742 ----EDIQWLVNLEVLILSNN--LLKKLPRGIGA---LRKLRVLDIEENKLESIPTEI 790
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/118 (26%), Positives = 57/118 (48%)
Frame = +3
Query: 366 VRTLSSDRDVVGSMHSDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEISIQNCKILRLP 545
+ L + V GS +L ++ +QL T FG L E+++ +I +LP
Sbjct: 261 INALRKMKGVSGSNSLTFKSKLNVKDNQL----TSLPLDFGSWISLVELNVATNQISKLP 316
Query: 546 GNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPSDL 719
E ++ L +L++ ++N + K+L +GA LR L LD+ N + IP+++
Sbjct: 317 ----EDIQWLVNLEVLILSNN--LLKKLPRGIGA---LRKLRVLDIEENKLESIPTEI 365
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 32.3 bits (70), Expect = 0.41
Identities = 21/66 (31%), Positives = 24/66 (36%)
Frame = -1
Query: 549 CPEVAISCNFESISPLDLASFQNDDP*GCSRTGAGYSGL*AAPCHPSASNRRHLCPTTTS 370
CPE S N I L FQ DP G TG G PC P N ++ +
Sbjct: 335 CPEGYYSENNSPICQLCKPGFQCSDPSGVCPTGGYCDGQTFYPCSPGTYNSKNGSANNAA 394
Query: 369 VHCTPP 352
PP
Sbjct: 395 CTSCPP 400
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +3
Query: 462 STLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTL 641
ST+R +G+ + L +++++ ++ + F+ L LK L + + N+ +
Sbjct: 122 STIRGAFWGQNK-LQQLNLERNRLSHIQDTTFKHLLALKVLNLAN-------NRIYHISQ 173
Query: 642 GAFNGLRXLHTLDLAYNNI 698
G+F+ LR L LDL+ N+I
Sbjct: 174 GSFSDLRSLEGLDLSNNDI 192
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 417 HPSASNRRHLCPTTTSVHCTP--PYRPHLPHENTHLHRPVLP*APRPSQNKR 268
H + R L PT P P RP PH HRP+ P PRP + R
Sbjct: 168 HRPLESHRPLEPTRPQESHRPLEPPRPQEPHRPQEPHRPLEP--PRPQEQHR 217
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 354 PYRPHLPHENTHLHRPVLP*APRPSQNKR 268
P+RP PH HRP+ P PRP + R
Sbjct: 83 PHRPQEPHRPLEPHRPLEP--PRPQEPHR 109
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 354 PYRPHLPHENTHLHRPVLP*APRPSQNKR 268
P RP PH HRP+ P PRP + R
Sbjct: 113 PPRPQEPHRPQEPHRPLEP--PRPQEQHR 139
>SB_22565| Best HMM Match : EGF (HMM E-Value=0.2)
Length = 250
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 323 VFSCGKCGRYGGVQCTDVVVGQRCRRFDALGWHGAAYNPL*PAPVREHPQGSS 481
V +C Y GV CTD+ G C +G G + + P P +++PQ +S
Sbjct: 27 VSNCSDDACYPGVNCTDISGGIACGPC-PVGLTGNGKSCVIPRPAKDNPQKTS 78
>SB_42531| Best HMM Match : DoxX (HMM E-Value=2)
Length = 210
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 37 GITRLRCYVAHLVLLYSLLTFIIVVIA-TFPHRARTFYST 153
G+ + + A+LV + L FI ++IA T+ H + FY T
Sbjct: 101 GVLKYGTFAANLVTMVLSLLFICLIIAFTYTHEDKVFYFT 140
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 486 GKMQGLAEISI---QNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNG 656
G+++ LA+ I N ++ LP ++ E LR L+ L + N +L A G
Sbjct: 58 GQLKDLADARILVLSNNRLTSLPADLDE-LRSLQVLDVA--------NNKLKSLPKAIGG 108
Query: 657 LRXLHTLDLAYNNIXKIPSDL 719
L L TLD+ NN+ +P ++
Sbjct: 109 LSSLQTLDVQGNNLQSLPLEI 129
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Frame = -1
Query: 675 KCGAXATR*KRPT*SPALYLCPIRCSSNVSSKTSDLASPRRRCPEV-AISCNFESISPLD 499
K GA T+ R P PI C S T+D S + P AIS S
Sbjct: 620 KRGANCTQCDRGHKCPVSSDPPIPCDPGYYSDTTDATSCTQCSPGYYAISSGQTSCIQCP 679
Query: 498 LASF---QNDDP*GC--SRTGAGYSGL*AAPCH-----PSASNRRHLCPTTT 373
S + + P C ++G +G PCH PS SN+ +CP+ T
Sbjct: 680 AGSRCPNRTETPVPCLAGQSGTFVNGTHCIPCHVGHYCPSQSNKPQVCPSGT 731
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 22 PCRRGGITRLRCYVAHLVLLYSLLTFIIVVIATFPHR 132
PCR ++ C H+V+ SL ++ VV++ FP R
Sbjct: 980 PCRYVVMSMSLCRYIHVVMSMSLCRYVHVVVSLFPCR 1016
>SB_32303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 285 GAALTEAPDDADACFRVASVDGMVECNVRTLSSDRDVVGSMHSDGTERLTI 437
GA ++ AP D+ C + D +V T SDR S +GT+ ++
Sbjct: 710 GARVSSAPQDSQTCDKQPVSDSPTVTDVSTSESDRVDARSADGEGTKMSSV 760
>SB_27056| Best HMM Match : DUF615 (HMM E-Value=2.4)
Length = 308
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = -2
Query: 641 QRKVQLFIYAPFVVHRTYLQRL---QTSQALEDVARKSQYLAILNR 513
+R ++L+I A +++H+TY+Q + Q ++ L ++ K Y + R
Sbjct: 133 KRDLKLYIDAAWIIHKTYMQEVLERQLAEGLTELNEKHGYAELPQR 178
>SB_24051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 889
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 429 AAPCHPSASNRRHLCPTTTSVHCTPPYRPHLPHENTHLHRPVLP*APRPSQNK-RILCL 256
AA A N+R P + TPP RP L RP+ A RP Q K R+L +
Sbjct: 488 AAFTRTPAVNQRATDPLVVADDVTPPARPPLAAAQQIKDRPLAVPASRPGQCKSRLLAI 546
>SB_50632| Best HMM Match : ShTK (HMM E-Value=0.0091)
Length = 566
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 275 FCDGRGAYGSTGRCRCVFSCGKCGRYG 355
+CD RG + R C +CG C R G
Sbjct: 526 YCDKRGKTAAHVRHACPKTCGNCSRVG 552
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Frame = -1
Query: 423 PCHPSASNRRHL-C----PTTTSVHCTP--PYRPHLPHENTHLHRPVLP*APRPSQNKRI 265
PC P ++ + C P + CTP PY+P P H+P +P P I
Sbjct: 32 PCTPDKPHKPDIPCTPDEPHKPDIPCTPDEPYKPDRPCTPDEPHKPDIPCTPDEPHKPDI 91
Query: 264 LC 259
C
Sbjct: 92 PC 93
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -1
Query: 384 PTTTSVHCTP--PYRPHLPHENTHLHRPVLP*AP 289
P+ + CTP PY+P P H+P +P P
Sbjct: 230 PSKPDIPCTPDKPYKPDRPCTQDKPHKPDIPCTP 263
>SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 375 TSVHCTPPYRPHLPHENTHLHRPVLP 298
T+VHC RPHL H N + R V+P
Sbjct: 237 TAVHCC---RPHLIHHNHEIGRVVIP 259
>SB_5424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 366 VRTLSSDRDVV--GSMHSDGTERLTIRCSQLLFESTLRDHHFG 488
VR LS++ +VV G H D R I C Q LF + H G
Sbjct: 293 VRELSTNEEVVIVGGSHRDQKGRWDIGCQQTLFRNWTMYHRGG 335
>SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047)
Length = 632
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 278 CDGRGAYGSTGRCRCV-FSCGKCGR 349
CD GA STG CR C KCG+
Sbjct: 219 CDRCGAKHSTGNCRAYGAECHKCGK 243
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 600 SSNVSSKTSDLASPRRRCPEVAISCNFESISPLDLASFQ 484
S N+S K SP+++ P +C F IS L + Q
Sbjct: 643 SKNLSHKHGSFGSPKKQNPSKCFTCKFCGISFLQIRRLQ 681
>SB_43726| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-31)
Length = 516
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 444 YSGL*AAPCHPSASNRRHLCPTTTSVHCTPPYRPHLPHENTHLHRPVLP*APRP 283
Y G + HPS S R+H+ +H P PH+ HE+++ ++P + +P P
Sbjct: 442 YEGCNKSYTHPS-SLRKHM-----KLHGMSPSPPHMLHESSNDNQPEVIDSPSP 489
>SB_53342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 368 TDVVVGQRCRRFDALGWHGAAYNPL 442
T +V G + +RFDALG G ++P+
Sbjct: 17 TSIVPGWQLKRFDALGSSGELFDPV 41
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 417 HPSASNRRHLCPTTTSVHCTPPYRPHLPHENTHLHRPVLP*APRPSQNKRI 265
HP ++ P T TP PH+PH +T P + A P+ + I
Sbjct: 165 HPHIAHASTTHPYITYAS-TPTTHPHIPHASTTTTHPYIARASTPTTHPHI 214
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 423 PCHPSASNRRHLCPTTTSVHCTPPYRPHLPHENTHLHRPVLP*APRPSQN 274
P H +++ H TT+ H H + NT L +PV P+P N
Sbjct: 703 PQHNTSTTSHHYTTKTTTQHFYNQSPLHHQNHNTTLLQPVTITPPKPQHN 752
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,051,439
Number of Sequences: 59808
Number of extensions: 547442
Number of successful extensions: 1789
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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