Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N13
(729 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58150.1 68418.m07278 leucine-rich repeat transmembrane prote... 42 6e-04
At1g03440.1 68414.m00324 leucine-rich repeat family protein cont... 35 0.048
At3g53240.1 68416.m05868 leucine-rich repeat family protein cont... 32 0.45
At2g20850.1 68415.m02457 leucine-rich repeat protein kinase, put... 31 0.59
At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR ... 31 0.78
At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR ... 31 0.78
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 31 1.0
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 31 1.0
At4g04220.1 68417.m00598 disease resistance family protein conta... 31 1.0
At4g03010.1 68417.m00409 leucine-rich repeat family protein cont... 30 1.4
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR... 30 1.4
At5g20710.1 68418.m02459 beta-galactosidase, putative / lactase,... 30 1.8
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 30 1.8
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR... 30 1.8
At5g39560.1 68418.m04792 kelch repeat-containing F-box family pr... 29 4.2
At1g66150.1 68414.m07508 leucine-rich repeat protein kinase, put... 29 4.2
At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein... 29 4.2
At1g09040.1 68414.m01008 expressed protein 29 4.2
At5g35450.1 68418.m04215 disease resistance protein (CC-NBS-LRR ... 28 5.5
At1g64860.1 68414.m07353 RNA polymerase sigma subunit SigA (sigA... 28 5.5
At3g51550.1 68416.m05645 protein kinase family protein contains ... 28 7.3
At2g25790.1 68415.m03095 leucine-rich repeat transmembrane prote... 28 7.3
At5g20630.1 68418.m02450 germin-like protein (GER3) identical to... 27 9.6
At3g24440.1 68416.m03067 fibronectin type III domain-containing ... 27 9.6
At3g11330.1 68416.m01378 leucine-rich repeat family protein 27 9.6
At3g11080.1 68416.m01339 disease resistance family protein conta... 27 9.6
>At5g58150.1 68418.m07278 leucine-rich repeat transmembrane protein
kinase, putative
Length = 785
Score = 41.5 bits (93), Expect = 6e-04
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Frame = +3
Query: 372 TLSSDRDVVGSMHSDGTER-LTIRCSQLLFESTLRDHHFGKMQGLAEISIQNCKILRLPG 548
T SS G + D +E L I S L ++ D+ GKM L + + KI LP
Sbjct: 48 TFSSLCSWPGVVVCDSSENVLHISASGLDLSGSIPDNTIGKMSKLQTLDLSGNKITSLPS 107
Query: 549 NVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNI-XKIPS 713
+++ L L+SL + S I++ L +G F L HTLDL++N+I KIP+
Sbjct: 108 DLWS-LSLLESLNLSSNR----ISEPLPSNIGNFMSL---HTLDLSFNSISGKIPA 155
>At1g03440.1 68414.m00324 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 397
Score = 35.1 bits (77), Expect = 0.048
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 474 DHHFGKMQGLAEISIQNCKIL-RLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAF 650
D GK+ L E+SI +I+ LP + + LK L+ +++ + I+ E+ +LG
Sbjct: 92 DPAIGKLSALTELSIVPGRIMGALPATISQ----LKDLRFLAISRNF-ISGEIPASLGEV 146
Query: 651 NGLRXLHTLDLAYNNI 698
GLR TLDL+YN +
Sbjct: 147 RGLR---TLDLSYNQL 159
>At3g53240.1 68416.m05868 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 891
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 540 LPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNI-XKIPSD 716
L GN+ E L LK ++RS+N N G+F+ LR + +LDL++N + IPS
Sbjct: 714 LSGNIPEELGDLK--RVRSLN--LSRNSLSGSIPGSFSNLRSIESLDLSFNKLHGTIPSQ 769
Query: 717 L 719
L
Sbjct: 770 L 770
>At2g20850.1 68415.m02457 leucine-rich repeat protein kinase,
putative contains Pfam domains PF00560: Leucine Rich
Repeat and PF00069: Protein kinase domain
Length = 772
Score = 31.5 bits (68), Expect = 0.59
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 474 DHHFGKMQGLAEISIQNCKIL--RLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGA 647
+H G + +S+QN + G + E L LKSL + S+NN K D
Sbjct: 107 NHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPD----V 162
Query: 648 FNGLRXLHTLDLAYNNI 698
F L + +DL+ NN+
Sbjct: 163 FQDLGLMINIDLSSNNL 179
>At5g48620.1 68418.m06013 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 908
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEW 611
G M L ++I +C+ L+ + + + LK LKIR M EW
Sbjct: 840 GSMPCLRTLTIHDCEKLKELPDGLKYITSLKELKIREMKREW 881
>At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 906
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEW 611
G M L ++I NCK L+ + + + LK LKI M EW
Sbjct: 838 GSMPCLRTLTIDNCKKLKQLPDGLKYVTCLKELKIERMKREW 879
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEW 611
G M L ++I +CK L+ + + + LK LKI M EW
Sbjct: 840 GSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREW 881
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 486 GKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEW 611
G M L ++I +CK L+ + + + LK LKI M EW
Sbjct: 840 GSMPCLRTLTIDDCKKLKELPDGLKYITSLKELKIEGMKREW 881
>At4g04220.1 68417.m00598 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-2A [Lycopersicon
pimpinellifolium] gi|3894389|gb|AAC78594
Length = 811
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 537 RLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNI-XKIPS 713
+L G + L LKSLK+ +++N N+ +F L + +LDL++NN+ +IP
Sbjct: 653 KLHGEIPTSLGNLKSLKVLNLSN----NEFSGLIPQSFGDLEKVESLDLSHNNLTGEIPK 708
Query: 714 DL 719
L
Sbjct: 709 TL 710
>At4g03010.1 68417.m00409 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0A
[Lycopersicon esculentum] gi|3894385|gb|AAC78592
Length = 395
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +3
Query: 474 DHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFN 653
D GK+ L E+SI +I+ G++ + K+L+ +++ + I+ E+ +L
Sbjct: 90 DPAIGKLSALTELSIVPGRIM---GSLPHTISQSKNLRFLAISRNF-ISGEIPASLSELR 145
Query: 654 GLRXLHTLDLAYNNI 698
GL+ TLDL+YN +
Sbjct: 146 GLK---TLDLSYNQL 157
>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1556
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 483 FGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSL 584
FGK++ L E+ + NCK+L+ F L+ L L
Sbjct: 1145 FGKLENLVELRMNNCKMLKRLPKSFGDLKSLHRL 1178
>At5g20710.1 68418.m02459 beta-galactosidase, putative / lactase,
putative strong similarity to beta-galactosidase
precursor (EC 3.2.1.23) (Lactase) SP:P49676 from
[Brassica oleracea]
Length = 769
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 278 CDGRGAYGSTGRCRCVFSCGK 340
CD RGAYGS +C F CGK
Sbjct: 618 CDYRGAYGSD---KCAFMCGK 635
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 420 CHPSASNRRHLCPTTTSVHCTPPYRPHLPHENTHLHRPVLP 298
C PS + P V C PP RP +P N RPV P
Sbjct: 30 CKPSPKPKPVPSPKPKPVQCPPPPRPSVPSPNP---RPVTP 67
>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1544
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 483 FGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIR 593
FGK++ L E+ + NCK+L+ F L+ L L ++
Sbjct: 1131 FGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMK 1167
>At5g39560.1 68418.m04792 kelch repeat-containing F-box family
protein contains Pfam PF00646: F-box domain; contains
Pfam PF01344 : Kelch motif
Length = 395
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 405 MHSDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEI 512
+ SDG +++ I C+Q+ E +D +GK++ + +
Sbjct: 342 VQSDGKDKIEIWCAQIALEKRSKDEIWGKIEWINSV 377
>At1g66150.1 68414.m07508 leucine-rich repeat protein kinase,
putative (TMK1) identical to protein kinase TMK1
gi|166888|gb|AAA32876, SP|P43298 Putative receptor
protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis
thaliana}
Length = 942
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 540 LPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFNGLRXLHTLDLAYNNIXKIPSDL 719
L G + LR L L+ + +W + + + +GL L L L+ NN IPSD+
Sbjct: 76 LQGTLSPDLRNLSELE--RLELQWN---NISGPVPSLSGLASLQVLMLSNNNFDSIPSDV 130
Query: 720 F 722
F
Sbjct: 131 F 131
>At1g65070.1 68414.m07377 DNA mismatch repair MutS family protein
contains Pfam profile PF00488: MutS domain V
Length = 857
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = -2
Query: 482 MMIPEGALEQELATADCKPLRAIRVHRTDDISVRRQRPYIALHHTVHTCHTKTRICIVRC 303
+++ G + + D KPL +T + S+R +R + + H + R C+
Sbjct: 742 VLVQHGKIRVRIKKKDIKPLPRSTSSQTSNRSLRSKRQFFVVPDNCTDKHERARQCVANA 801
Query: 302 FRKRRAHHKTKEY 264
++ A KE+
Sbjct: 802 -KRTSADSNVKEH 813
>At1g09040.1 68414.m01008 expressed protein
Length = 911
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +2
Query: 284 GRGAYGSTGRCRCVFSCGKCGRYGGVQCTDVVVGQRCRRFDALGWH 421
G G Y S + C R +C D+ G R A GWH
Sbjct: 308 GEGDYNSLTSAGIINQLTGCSRLSKARCNDIFWGAVWPRLLARGWH 353
>At5g35450.1 68418.m04215 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 901
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 486 GKMQGLAEISIQNC-KILRLPGNVFEGLRGLKSLKIRSMNNEW 611
G M L ++ I +C K+ LP + + + LK LKI M EW
Sbjct: 831 GSMPCLRDLIIHSCEKLEELPDGL-KYVTSLKELKIEGMKREW 872
>At1g64860.1 68414.m07353 RNA polymerase sigma subunit SigA (sigA) /
sigma factor 1 (SIG1) identical to sigma factor SigA
[Arabidopsis thaliana] GI:5478439, sigma factor 1
[Arabidopsis thaliana] GI:2353171, plastid RNA
polymerase sigma-subunit [Arabidopsis thaliana]
GI:2398851; contains Pfam profiles PF04545: Sigma-70,
region 4, PF04539: Sigma-70 region 3, PF04542: Sigma-70
region 2
Length = 502
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 495 QGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTLGAFN-GLRXLH 671
QG++ + N + LRLP ++ E L +++ K+R E GI +D + N + +
Sbjct: 321 QGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRL--QEKGITPSIDRIAESLNMSQKKVR 378
Query: 672 TLDLAYNNIXKIPSDLF 722
A + + + D F
Sbjct: 379 NATEAVSKVFSLDRDAF 395
>At3g51550.1 68416.m05645 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 895
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 462 STLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTL 641
S LR H + G E +NC+++ + + G K ++ + W + L+ +
Sbjct: 586 SKLRHRHLVSLIGYCE---ENCEMILVYDYMAHGTMREHLYKTQNPSLPW--KQRLEICI 640
Query: 642 GAFNGLRXLHT 674
GA GL LHT
Sbjct: 641 GAARGLHYLHT 651
>At2g25790.1 68415.m03095 leucine-rich repeat transmembrane protein
kinase, putative
Length = 960
Score = 27.9 bits (59), Expect = 7.3
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 462 STLRDHHFGKMQGLAEISIQNCKILRLPGNVFEGLRGLKSLKIRSMNNEWGINKELDFTL 641
+ L H G + L+ + +L G V L +K+LK + ++ E+ + +
Sbjct: 179 NVLTGHVPGYLGNLSRLEFLTLASNQLTGGVPVELGKMKNLKWIYLGYN-NLSGEIPYQI 237
Query: 642 GAFNGLRXLHTLDLAYNNI-XKIPSDL 719
G GL L+ LDL YNN+ IP L
Sbjct: 238 G---GLSSLNHLDLVYNNLSGPIPPSL 261
>At5g20630.1 68418.m02450 germin-like protein (GER3) identical to
germin-like protein subfamily 3 member 3 [SP|P94072]
Length = 211
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 436 IVSRSVPSECIEPTTSLSDDNVRTLHSTIPST 341
+ + +PSE +E TT LSD V+ L + T
Sbjct: 179 LFANDLPSELVEATTFLSDAEVKKLKGVLGGT 210
>At3g24440.1 68416.m03067 fibronectin type III domain-containing
protein contains Pfam profile PF00041: Fibronectin type
III domain
Length = 602
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 314 CRCVFSCGKCGRYGGVQCTDVVVGQRCRRFDAL 412
C C +SCGK + G +V + RR D L
Sbjct: 128 CFCCYSCGKVSQILGCWKKQLVAAKEARRRDGL 160
>At3g11330.1 68416.m01378 leucine-rich repeat family protein
Length = 499
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 357 ECNVRTLSSDRDVVGSMH---SDGTERLTIRCSQLLFESTLRDHHFGKMQGLAEISIQNC 527
E NV + + +VVG + ++ +R+ + +L L FG++QGL +++ N
Sbjct: 176 EENVAAVEVNEEVVGILQHASANPVDRVDLSGRKL----RLLPEAFGRIQGLLVLNLSNN 231
Query: 528 KILRLPGNVFEGLRGLKSLKIRSMNNE 608
K+ +P ++ GL L L + + + E
Sbjct: 232 KLESIPDSI-AGLHSLVELDVSTNSLE 257
>At3g11080.1 68416.m01339 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 943
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 570 GLKSLKIRSMNNEWGINKELDFTLGAFN-GLRXLHTLDLAYNN 695
GL S++ SM + + N + +F GLR L+TLDL+ NN
Sbjct: 538 GLSSVRKPSMIHLFASNNNFTGKIPSFICGLRSLNTLDLSENN 580
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,137,177
Number of Sequences: 28952
Number of extensions: 354044
Number of successful extensions: 1151
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -