Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N07
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      34   0.001
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      34   0.001
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.080
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 361 VETPLLFPSLHRAHSPGHLLKVFPSASITSPTRMDTSPLVMLSPL-PHQCLSRSLVLLPT 537
           + +P     L    SPG ++   PS S+ SP+    SP ++ SPL PH+      V LP 
Sbjct: 681 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFD---VKLPP 737

Query: 538 SP 543
            P
Sbjct: 738 PP 739


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 361 VETPLLFPSLHRAHSPGHLLKVFPSASITSPTRMDTSPLVMLSPL-PHQCLSRSLVLLPT 537
           + +P     L    SPG ++   PS S+ SP+    SP ++ SPL PH+      V LP 
Sbjct: 573 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFD---VKLPP 629

Query: 538 SP 543
            P
Sbjct: 630 PP 631


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 366  NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPV 506
            +P A+    QGS S  S EGVP+    V   +G    G+    SPPV
Sbjct: 1086 DPVALKSAQQGSSS--SSEGVPLKGTAVPPPSGSSGPGSTGSKSPPV 1130


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/52 (21%), Positives = 20/52 (38%)
 Frame = -3

Query: 224 YYSDGGNRGDRDRQKRSRSGHGNERPVCAVPVWVLLXEXIXIPDLGGNRCHH 69
           Y+   G  G    Q  S +GH +E+   A   +      + +     ++ HH
Sbjct: 4   YFEQSGFYGSHHHQSGSVAGHHHEQSAAAAAAYRSFPLSLGMSPYASSQHHH 55


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 472 PLVMLSPLPHQCLSRSLVLLPTSPRTFLSRS 564
           P+V LS     C S  L   PT P T  SR+
Sbjct: 75  PVVSLSTCSMLCGSTQLWPQPTGPVTLASRA 105


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 258 VKFGNEINPDGSYTYFY 308
           +KFG + +P+G Y   Y
Sbjct: 429 IKFGRKADPNGDYIRKY 445


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 429 EHLQEMSRRMSPVQRREQQGG 367
           +HLQE+  R+      EQ  G
Sbjct: 166 QHLQELGLRLEDANSDEQDDG 186


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 429 EHLQEMSRRMSPVQRREQQGG 367
           +HLQE+  R+      EQ  G
Sbjct: 166 QHLQELGLRLEDANSDEQDDG 186


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 429 EHLQEMSRRMSPVQRREQQGG 367
           +HLQE+  R+      EQ  G
Sbjct: 166 QHLQELGLRLEDANSDEQDDG 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,271
Number of Sequences: 336
Number of extensions: 3704
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)