BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_N07 (676 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 97 1e-22 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.50 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.1 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 6.1 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.1 AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 8.1 >EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle protein protein. Length = 138 Score = 97.1 bits (231), Expect = 1e-22 Identities = 45/90 (50%), Positives = 64/90 (71%) Frame = +3 Query: 273 EINPDGSYTYFYETNNGIAAQEQGVPRNLGGNPPAVPVVAQGSFSWTSPEGVPISVNYVA 452 E+N DG+Y +ET+NGI+ QE G P+ + PVV+QGS S+T+P+G +S+ YVA Sbjct: 35 EVNFDGNYINNFETSNGISHQESGQPKQVDNE---TPVVSQGSDSYTAPDGQQVSITYVA 91 Query: 453 DENGYQPTGNAIPTSPPVPEQIARALAYIA 542 DENG+Q G+ IPT+PP+P +I RAL + A Sbjct: 92 DENGFQVQGSHIPTAPPIPPEIQRALEWNA 121 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 25.4 bits (53), Expect = 0.50 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +3 Query: 417 PEGVP-ISVNYVADENGYQPTGNAIPTSPPVPEQIARA 527 PE VP + ++ + G G+ TSPP P I+RA Sbjct: 1369 PERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRA 1406 Score = 21.4 bits (43), Expect = 8.1 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +3 Query: 144 YRPFVSVTTPTPFLPIPISSVAP 212 + PF + P PF+P P + AP Sbjct: 1158 FTPF-NFWNPPPFMPSPFMAGAP 1179 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 21.8 bits (44), Expect = 6.1 Identities = 9/32 (28%), Positives = 13/32 (40%) Frame = +3 Query: 225 PKVSEGYGAETVKFGNEINPDGSYTYFYETNN 320 PK+ +T+ N N + Y Y NN Sbjct: 79 PKIISSLSNKTIHNNNNYNNNNYNNYNYNNNN 110 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 21.8 bits (44), Expect = 6.1 Identities = 8/21 (38%), Positives = 9/21 (42%) Frame = +2 Query: 488 PHFPTSA*ADRSCSCLHRQEH 550 P PT D C+ LH H Sbjct: 455 PQLPTEESVDALCNTLHHWHH 475 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.4 bits (43), Expect = 8.1 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -1 Query: 412 VQENEPCATTGTAGGFPPRLRGTPCS 335 V ++E + T TAG FP + T S Sbjct: 714 VSKHEEVSRTSTAGQFPTNVATTVTS 739 >AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate dehydrogenase protein. Length = 363 Score = 21.4 bits (43), Expect = 8.1 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +3 Query: 252 ETVKFGNEINPDGSYTYFYET 314 E +KF N P G T F+E+ Sbjct: 236 EIIKFVNIFFPGGKKTTFFES 256 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 188,459 Number of Sequences: 438 Number of extensions: 4906 Number of successful extensions: 15 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20464920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -