Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N06
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.0  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 384 LKKIANSSRNLHNNVKDPSYVF 449
           LKK+A +SR    + KD  YVF
Sbjct: 259 LKKMAENSRMSKLSSKDDEYVF 280


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 459 RKFYNIMQILLIRLHKKDPDC 521
           + F N+ Q+ L  LH+  P+C
Sbjct: 94  QNFQNLTQLYLTLLHQIQPNC 114


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 347  MVDIFPFSLISSFVIFFPALSTTV 276
            MVD +  S I  F +F   LST V
Sbjct: 3002 MVDAYEKSSIPGFSVFLQILSTAV 3025


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,990
Number of Sequences: 2352
Number of extensions: 10378
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)