Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N06
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   8.6  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 335 RYQPWISTSENSKLILFKKNSE 400
           R + W++TS      LF +NSE
Sbjct: 271 RVESWVNTSVIRNYTLFNENSE 292


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  MTKVAIILLILAAVYGLEGAA 138
           M    ++L+ LAA+ G +GA+
Sbjct: 1   MLSKVVLLVALAAICGAQGAS 21


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  MTKVAIILLILAAVYGLEGAA 138
           M    ++L+ LAA+ G +GA+
Sbjct: 1   MLSKVVLLVALAAICGAQGAS 21


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 415 CIIMLKILPTYFMTNES 465
           CII L  +P YF T  +
Sbjct: 716 CIIWLAFVPIYFGTGNA 732


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 415 CIIMLKILPTYFMTNES 465
           CII L  +P YF T  +
Sbjct: 806 CIIWLAFVPIYFGTGNA 822


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 459 RKFYNIMQILLIRLHKKDPDCFL*SFSKIFEH 554
           R+  N   I  ++ H KD D  L    K F H
Sbjct: 249 RRLSNKGSISKLQFHNKDDDLILTLGKKEFSH 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,863
Number of Sequences: 438
Number of extensions: 2813
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)