Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_N02
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.2  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   6.2  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   8.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 340 NICRFAKKYHMYNCKQSMCLWHEIYNVGSTRSTNWSPRYNTCWWDGIYVKCTFLF 504
           N C+F     +YNC  S  L   +      ++  W  RY T    G+ V+ T LF
Sbjct: 140 NYCQF-----LYNCFHSTLLLMILSRYQRLKAQLWQNRYETV-AHGMTVQKTTLF 188


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 18  PFVSVVIVTTLNSLLICITAK*FMRYLQQWQRSRPKF 128
           P   +   T +N   IC +A   +    QW RS P F
Sbjct: 184 PLPPIFAPTMINPSAICESAAQLLFMNVQWVRSIPAF 220


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 424  CQHYRFHARGTYFVYSCTYGTFWQTCK 344
            C  Y     G Y V++C  G  W   K
Sbjct: 1291 CTRYLHCLWGKYEVFNCAPGLHWDNNK 1317



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +1

Query: 394  CLW--HEIYNVGSTRSTNWSPRYNTCWW 471
            CLW  +E++N       +W    N C W
Sbjct: 1297 CLWGKYEVFNCAP--GLHWDNNKNICDW 1322


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +1

Query: 412 YNVGSTRSTNWSP-RYNT-CWWDGIYVKCTFLFEER*NFVWRN 534
           +++G+  S   +P +Y     +   Y  C FL E+    VW N
Sbjct: 775 FDIGAPASGGGTPGKYTAEAGFMSFYEICDFLHEDNTTLVWDN 817


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 403 ARGTYFVYSCTYGTFWQTCKYYSLSC 326
           A+G+   Y+C    +W+ C+    +C
Sbjct: 46  AKGSLKQYTCELKLWWEFCQRNGHNC 71


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 578 YNKFHMGNCAENTAKKLQITRQDQ 649
           +    +G+  +  A+KLQ+  QDQ
Sbjct: 15  HKNVQVGDLVQKIAQKLQVLFQDQ 38


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 18  PFVSVVIVTTLNSLLICITAK*FMRYLQQWQRSRPKF 128
           P   +   T +N   IC +A   +    QW RS P F
Sbjct: 184 PLPPIFPPTMINPSAICESAAQLIFMNVQWVRSIPAF 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,342
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)