Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_N02
(772 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 215 2e-56
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 212 2e-55
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 198 3e-51
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 198 3e-51
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 198 3e-51
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 198 4e-51
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 88 5e-18
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 85 4e-17
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 85 4e-17
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 81 8e-16
At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] syntha... 30 1.9
At3g53680.1 68416.m05928 PHD finger transcription factor, putati... 29 3.4
At5g48120.1 68418.m05944 expressed protein low similarity to MMS... 29 4.5
At4g24970.1 68417.m03578 ATP-binding region, ATPase-like domain-... 29 4.5
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 5.9
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 5.9
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 28 7.9
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 215 bits (526), Expect = 2e-56
Identities = 113/220 (51%), Positives = 141/220 (64%), Gaps = 2/220 (0%)
Frame = +2
Query: 104 MAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEV 283
MA S V+ +V I RTPM + AA++RA + ++EV
Sbjct: 1 MAHTSESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEV 60
Query: 284 YIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIIL 463
GNV SANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++
Sbjct: 61 VFGNVLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 120
Query: 464 AGGMESMSNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQIT 637
AGGMESMSN P YL R + +G LVDG++ DGL DVYN MG+CAE A+K QIT
Sbjct: 121 AGGMESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQIT 180
Query: 638 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP 757
R+ QD+YAV S++R AA EA AF E+VPV V RG P
Sbjct: 181 REQQDDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRP 220
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 212 bits (518), Expect = 2e-55
Identities = 110/213 (51%), Positives = 138/213 (64%), Gaps = 2/213 (0%)
Frame = +2
Query: 125 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 304
V ++V I RTPM + AA++RA + ++EV GNV S
Sbjct: 3 VDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLS 62
Query: 305 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 484
ANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++AGGMESM
Sbjct: 63 ANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESM 122
Query: 485 SNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEY 658
SN P YL R + +G LVDG++ DGL DVYN MG+CAE A+K QITR+ QD+Y
Sbjct: 123 SNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQDDY 182
Query: 659 AVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP 757
AV S++R AA EA AF E+VPV V RG P
Sbjct: 183 AVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRP 215
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 198 bits (483), Expect = 3e-51
Identities = 100/211 (47%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Frame = +2
Query: 137 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 316
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 317 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 496
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 497 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 670
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 671 YKRSAAAYEAKAFVDELVPVPVPQKRGAPVI 763
++R AA + F E+VPV V RG P +
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSV 224
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 198 bits (483), Expect = 3e-51
Identities = 100/211 (47%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Frame = +2
Query: 137 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 316
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 317 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 496
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 497 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 670
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 671 YKRSAAAYEAKAFVDELVPVPVPQKRGAPVI 763
++R AA + F E+VPV V RG P +
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSV 224
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 198 bits (483), Expect = 3e-51
Identities = 100/211 (47%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Frame = +2
Query: 137 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 316
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 317 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 496
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 497 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 670
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 671 YKRSAAAYEAKAFVDELVPVPVPQKRGAPVI 763
++R AA + F E+VPV V RG P +
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSV 224
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 198 bits (482), Expect = 4e-51
Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Frame = +2
Query: 137 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 316
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 317 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 496
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 497 FYL---KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 667
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+
Sbjct: 134 KYLPDASRRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQ 193
Query: 668 SYKRSAAAYEAKAFVDELVPVPVPQKRGAPVI 763
S++R AA + F E+VPV V RG P +
Sbjct: 194 SFERGIAAQNTQLFAWEIVPVEVSTGRGRPSV 225
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 88.2 bits (209), Expect = 5e-18
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Frame = +2
Query: 134 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 310
++VVI +A RTP+ V A IE+ + E+ ++ +G V +
Sbjct: 50 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPG 109
Query: 311 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 487
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 110 SQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Query: 488 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 667
P ++ G V+ V MG +EN A++ ++RQ+QD+ AV+
Sbjct: 170 TNPM-------AWEGS--VNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVD 220
Query: 668 SYKRSAAAYEAKAFVDELVPV 730
S++++AAA A F DE++PV
Sbjct: 221 SHRKAAAATAAGKFKDEIIPV 241
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 85.4 bits (202), Expect = 4e-17
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Frame = +2
Query: 134 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 310
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 49 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 108
Query: 311 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 487
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 109 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 168
Query: 488 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 667
++ G + D F D MG +EN A++ +TR++QD AV
Sbjct: 169 T--DHIPGGGFHGSNPRAQD---FPKARDCL--LPMGITSENVAERFGVTREEQDMAAVE 221
Query: 668 SYKRSAAAYEAKAFVDELVPV 730
S+KR+AAA + DE++PV
Sbjct: 222 SHKRAAAAIASGKLKDEIIPV 242
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 85.4 bits (202), Expect = 4e-17
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Frame = +2
Query: 134 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 310
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 6 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 65
Query: 311 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 487
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 66 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 125
Query: 488 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 667
++ G + D F D MG +EN A++ +TR++QD AV
Sbjct: 126 T--DHIPGGGFHGSNPRAQD---FPKARDCL--LPMGITSENVAERFGVTREEQDMAAVE 178
Query: 668 SYKRSAAAYEAKAFVDELVPV 730
S+KR+AAA + DE++PV
Sbjct: 179 SHKRAAAAIASGKLKDEIIPV 199
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 81.0 bits (191), Expect = 8e-16
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Frame = +2
Query: 134 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 310
++VVI +A RT + V A IE+ + E+ ++ +G V
Sbjct: 42 DDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPG 101
Query: 311 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 487
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 102 SQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 161
Query: 488 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 667
P RG + G + F+ + MG +EN A + ++R++QD+ AV+
Sbjct: 162 TNP----RG---WKGSVNPNVKKFEQAHNCL--LPMGITSENVAHRFNVSREEQDQAAVD 212
Query: 668 SYKRSAAAYEAKAFVDELVPV 730
S++++A+A + F DE+ PV
Sbjct: 213 SHRKAASATASGKFKDEITPV 233
>At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] synthase
II, putative similar to Swiss-Prot:P56902
3-oxoacyl-[acyl-carrier-protein] synthase II (EC
2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II)
[Rhizobium meliloti]
Length = 461
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 392 CASGMKSIMLAAQGLQTGAQDIILAGGMES 481
CA+G SI A + +Q G D+++AGG ES
Sbjct: 209 CATGAHSIGDATRMIQFGDADVMVAGGTES 238
>At3g53680.1 68416.m05928 PHD finger transcription factor, putative
predicted proteins, Arabidopsis thaliana
Length = 839
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 289 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCLWHEIYNVG--STRSTNWS 447
W C C GP TSC I + Y +N ++ + H Y++ S RS ++S
Sbjct: 523 WYCSSCNDGP----TSCKIATASWLYTYFNLNANILVLHSAYSLSPISDRSHDFS 573
>At5g48120.1 68418.m05944 expressed protein low similarity to MMS19
[Mus musculus] GI:14029390
Length = 1152
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 350 GLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYG 529
GLP I ++VC++G K + QGL+ + +ES FYL+ G
Sbjct: 605 GLPYQMILEATSEVCSTGPKYVEKMVQGLEEAFCSSLSDFYIESFLVSNFYLETTCQVNG 664
Query: 530 GMQLVD 547
+ +D
Sbjct: 665 NFESID 670
>At4g24970.1 68417.m03578 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 707
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 461 LAGGMESMSNVPFYLKRGETSYGGMQLVD 547
+AGG+E + N LKRG ++GG VD
Sbjct: 44 VAGGLEKVGNNFVGLKRGRDTFGGSSEVD 72
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -2
Query: 564 PSNTIPSTNC-IPPYEVSP 511
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -2
Query: 564 PSNTIPSTNC-IPPYEVSP 511
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription
factor (HB-14) identical to homeodomain transcription
factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis
thaliana];
Length = 852
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 442 WSPRYNTCWWDGIYVKC 492
W+ RY+TC DG YV C
Sbjct: 284 WTLRYSTCLEDGSYVVC 300
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,199,566
Number of Sequences: 28952
Number of extensions: 305540
Number of successful extensions: 840
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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