Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M24
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.8  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 424 YDIPGSVEEETGHH 465
           YD+ GS +  TGHH
Sbjct: 207 YDLRGSWDGVTGHH 220


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +1

Query: 136 SEFDHNSFVTRRRSNRDGSLQFEKQPAVR 222
           S+ DH + +   ++N+DG+   +K+P ++
Sbjct: 452 SQVDHKNNLGDSKNNQDGNNGEKKKPHIK 480


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +1

Query: 136 SEFDHNSFVTRRRSNRDGSLQFEKQPAVR 222
           S+ DH + +   ++N+DG+   +K+P ++
Sbjct: 344 SQVDHKNNLGDSKNNQDGNNGEKKKPHIK 372


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 424 YDIPGSVEEETGHH 465
           YD  G  E ETGH+
Sbjct: 279 YDFHGKWERETGHN 292


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +2

Query: 578 LVSGGFRSLIEPVAERLNIPTINIFANRLKFYFN---GTFRCNHDHSTL 715
           +++ G ++LI    +    PT   F N++K   N      +   DH++L
Sbjct: 202 VINDGIQALINDSRKVTRFPTELTFCNKIKHLVNLHKNLVKVAKDHNSL 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,053
Number of Sequences: 336
Number of extensions: 2870
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)