Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M24
(735 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 77 3e-15
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 35 0.010
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.032
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.52
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 29 0.91
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.91
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 1.2
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 28 1.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 27 2.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.7
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 3.7
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 6.4
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 25 8.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.5
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 8.5
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.5
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 25 8.5
>SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 77.0 bits (181), Expect = 3e-15
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Frame = +2
Query: 308 VCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRP-NVGQ 484
V FD+DST+IQ E IDELA G EV +T+ AM G + FQE+L++R+ +++ +V
Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138
Query: 485 IREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 664
I + I K + TPG +L L + G + + SGGF + E V +L++ +AN L
Sbjct: 139 INKVIGK--ITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDLD--YAYANVL 194
Query: 665 KFYFNGTF 688
+F +G F
Sbjct: 195 EFSDDGKF 202
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 35.1 bits (77), Expect = 0.010
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = -1
Query: 573 TMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSL 394
T TP++ ++ NS P SLT ++NS P + SS N+S PI S+ +
Sbjct: 2552 TSTPITSSTVVNSSTPITSLT---ALNSST-P----ITSSSVLNSS-----TPITSSTVV 2598
Query: 393 LTSSPFPQN-LASSSMPSSCMTVESTSKQ-TQSAVLNNSWTVC*GDITLIDTSESV 232
TS+P + + +SS P + T +TS T S+VLN+S + T ++TS S+
Sbjct: 2599 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT--SSTALNTSTSI 2652
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.5 bits (73), Expect = 0.032
Identities = 38/130 (29%), Positives = 65/130 (50%)
Frame = -1
Query: 624 LSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFF 445
+S + S + P T T + LS S T+S P VS T + + +S PT S L
Sbjct: 157 VSISSSSLSSSDPLTSSTFSSLS--SSTSSSQPSVSSTSSSTFSSAA-PT-STSSSYLSS 212
Query: 444 NASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTVC*G 265
++ + P +S+ S LTSS +L++SS+PS+ + STS S+ +++ +
Sbjct: 213 SSVVSSSSSPSSSSSSTLTSS----SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSS 268
Query: 264 DITLIDTSES 235
++I +S S
Sbjct: 269 SSSIISSSSS 278
Score = 29.9 bits (64), Expect = 0.39
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 624 LSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFF 445
LS++ + + P + + T L+ +S + S IP S + + + +SL + SS
Sbjct: 210 LSSSSVVSSSSSPSSSSSST-LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSS-- 266
Query: 444 NASWNVILPPIASAVS-LLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 298
++S ++I +S+ S TSS + +SSS P+S + S+S + S+
Sbjct: 267 SSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSS 316
Score = 26.6 bits (56), Expect = 3.7
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 627 SLSATGSIRLLNPPETRYTMTPLSCNSF-TNSVIPGVSLTGNFSMNSLI*PTL-GLMMSS 454
S+S+T S + T + + LS +S ++S P S + + +SL ++ SS
Sbjct: 188 SVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSS 247
Query: 453 LFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTV 274
++S + ++ S +SS + +SSS P+S + S+S + S+ + S T+
Sbjct: 248 SSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTI 307
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.52
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = -1
Query: 558 SCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSP 379
+C++ T S +S +G S S+ +G SS +F S + P +S+ S +SSP
Sbjct: 110 ACSTCTIST-SSLSYSGTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSP 165
Query: 378 FPQNLASSSMPSSCMTVESTSKQTQSA 298
+ SSS S + S+SK + S+
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSS 192
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 28.7 bits (61), Expect = 0.91
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 426 ILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTV 274
+L I A++LLT P +S+ SC +S K ++ +LN T+
Sbjct: 334 LLMEITKAIALLTQLKVPAPTFKTSVSISCSNFDSQIKYLENVLLNALGTI 384
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.7 bits (61), Expect = 0.91
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Frame = -1
Query: 654 AKMLIVGMFSLSATGS--IRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI* 481
+ LI+ F+ S S ++ + P T + +S +S ++ I S N +++S +
Sbjct: 440 SSFLIISTFTSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSNTTLHSSVQ 499
Query: 480 P------TLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVEST 319
T+ + S+ ++ S N PI + SL S FP + SSS S ++ T
Sbjct: 500 SSQSSQFTVSVPSSTQSYSTSSN-FTTPITISTSL---SSFPTTIVSSSFQYSSLSSNVT 555
Query: 318 SKQTQSAVLNNS 283
+ QS+ L++S
Sbjct: 556 TTNAQSSSLSSS 567
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 1.2
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = -1
Query: 594 NPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPP 415
+P ET TMT +C+S I VS T S + + ++S + +++ ++
Sbjct: 566 SPEETTTTMTTTTCSSRPEETISTVSTTSTVSESG----SSSASITSTYPSSTLSMTTSH 621
Query: 414 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQ 310
++S+ S+ +SS + SSSM STS Q
Sbjct: 622 LSSS-SVHSSSAHSSSSRSSSMSLPPSAGSSTSLQ 655
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 687 KVPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPE 583
+VP + N++ L + ++ + S SA GS+R PPE
Sbjct: 70 EVPSRANIAALKSLGVLAIVSFSAVGSLREDIPPE 104
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.6
Identities = 30/147 (20%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = -1
Query: 561 LSCNSFTNSVIPGVSLTGNFSM--NSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLT 388
LS +S S + L+G+ ++ S P+ ++ S + S + +P +S+ +
Sbjct: 497 LSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSS 556
Query: 387 SSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTVC*GDITLIDTSESVFNVAYCRL 208
+ ++SSS+PS+ +V S + S+ + S ++ + +S S + +
Sbjct: 557 ITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISS 616
Query: 207 LFKL*RAISVASSPSNETIMIEFTSIL 127
I + +PS ++MI +SI+
Sbjct: 617 SISSSSTILSSPTPSTSSLMISSSSII 643
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 423 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWT 277
LP + AVS +SS P + S+S +S S+ K T S SWT
Sbjct: 196 LPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSSLKKFYSWT 244
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.7
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = -1
Query: 567 TPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLT 388
T SC + T+ IP G+ S+++ I PT+ +S S ++ +PP +++ +
Sbjct: 168 TSTSCTTSTS--IPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTSTSSTDTN 218
Query: 387 SSPFPQNLASSSMPSSCMTVESTSKQT 307
SSP P S + +S T S+S T
Sbjct: 219 SSPLPTTSTSCTTSTSIPTGGSSSLST 245
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 3.7
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = -1
Query: 627 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 448
S+ + G+ ++ PP T PLS + TN+ +G+ S NS S +
Sbjct: 227 SVRSLGNSSVVRPPTRTSTTRPLSRVNVTNA-------SGSISKNS-------TSPSKVK 272
Query: 447 FNASWNVILPPIASAVSLLTSSPFPQNLASSSM-PSSCMTVESTSKQTQS 301
NAS ++ P A+ S F +N AS++ P+ T ST + S
Sbjct: 273 VNASTKIVRPVSAAQTVRPGSRIFRENSASNTQRPNVSATSNSTVRVASS 322
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 6.4
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 435 WNVILPPIASAVSLLTSSPF--PQN 367
WN++LP + +A+ ++ F PQN
Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEEPQN 469
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 8.5
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -3
Query: 697 IASESTIEIKLESISEDVDSWDV*SLRDRFY*TSESARN*IYDDSSLV*LFH*LCNTRS* 518
+ S + +K ++I+ V++ + S D+ S N + SL L+H LC+ R+
Sbjct: 546 LTGSSQVAMKFKTITPSVNTSEDDSANDQ---EIISTPNSDFQQLSLSRLYHVLCSNRNK 602
Query: 517 SNWKFLNEFS 488
N L+EF+
Sbjct: 603 KNTITLDEFA 612
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 8.5
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -1
Query: 561 LSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILP-PIASAVSLLTS 385
LS +FT S +SLT S S T+ SS+ S ++I+ PI S+ TS
Sbjct: 516 LSTENFT-SASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATS 574
Query: 384 SPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTVC 271
+ P L S PS+ S + + ++ TVC
Sbjct: 575 TSTPA-LTHSITPSNTSYTSSLIPSSSTDYSSSLITVC 611
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 368 TWPVHRCLHLV*RSSLHRSKRSPLS*TTPGQSVEATSR 255
TW + R H SL S SP PGQ VE + +
Sbjct: 267 TWGILRAFHYTDSLSLDDSYLSPKFEVAPGQIVELSPK 304
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 8.5
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 661 SISEDVDSWD 632
S+SEDVDSWD
Sbjct: 182 SVSEDVDSWD 191
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 8.5
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 140 NSIIIVSLLGEEATEMALYSLKSNLQYATLKTLSLVSISVMSPQQTVQEL 289
+SI VSL+G+ TE+AL + + A + V +++M+P QTV L
Sbjct: 144 SSIGYVSLVGKPKTEIALLAKILQDKGAIFYVKTTVPMAMMAP-QTVSNL 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,745,800
Number of Sequences: 5004
Number of extensions: 54410
Number of successful extensions: 237
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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