Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M24
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 143 1e-34
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 143 1e-34
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 138 4e-33
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 138 4e-33
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 31 0.64
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.6
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.6
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 4.5
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 6.0
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 28 7.9
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 7.9
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical... 28 7.9
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 143 bits (347), Expect = 1e-34
Identities = 71/134 (52%), Positives = 90/134 (67%)
Frame = +2
Query: 269 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALK 448
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL
Sbjct: 46 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALA 105
Query: 449 KRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERL 628
RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE L
Sbjct: 106 ARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAELL 165
Query: 629 NIPTINIFANRLKF 670
I I+AN + F
Sbjct: 166 GIEKSRIYANEILF 179
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 143 bits (347), Expect = 1e-34
Identities = 71/134 (52%), Positives = 90/134 (67%)
Frame = +2
Query: 269 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALK 448
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL
Sbjct: 43 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALA 102
Query: 449 KRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERL 628
RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE L
Sbjct: 103 ARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAELL 162
Query: 629 NIPTINIFANRLKF 670
I I+AN + F
Sbjct: 163 GIEKSRIYANEILF 176
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 138 bits (334), Expect = 4e-33
Identities = 71/136 (52%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Frame = +2
Query: 269 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQ--EA 442
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F+ +A
Sbjct: 47 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDA 106
Query: 443 LKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAE 622
L RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE
Sbjct: 107 LAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAE 166
Query: 623 RLNIPTINIFANRLKF 670
L I I+AN + F
Sbjct: 167 LLGIEKSRIYANEILF 182
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 138 bits (334), Expect = 4e-33
Identities = 71/136 (52%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Frame = +2
Query: 269 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQ--EA 442
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F+ +A
Sbjct: 30 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDA 89
Query: 443 LKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAE 622
L RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE
Sbjct: 90 LAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAE 149
Query: 623 RLNIPTINIFANRLKF 670
L I I+AN + F
Sbjct: 150 LLGIEKSRIYANEILF 165
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = -3
Query: 178 CFFSE*RNYYDRIHFNLIY*LRYYLSFVKVTSVIMKDPLCGKYDEHASVEC 26
C+++E NY++ N + Y+ SF + + I+++ L GK+++ + C
Sbjct: 1502 CYWNEGMNYWETDCGNFYGAIIYFCSFYLIITYIVRNLLVGKFEKLTIINC 1552
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 304 VRCPEQLLDSLLRRHHADRHQ*ERLQRRVLQVAFQTVK 191
+R EQ LD RRH + +RRV +V FQ V+
Sbjct: 1832 IRAIEQELDGEQRRHQDTEKNWRKAERRVKEVEFQVVE 1869
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 304 VRCPEQLLDSLLRRHHADRHQ*ERLQRRVLQVAFQTVK 191
+R EQ LD RRH + +RRV +V FQ V+
Sbjct: 1832 IRAIEQELDGEQRRHQDTEKNWRKAERRVKEVEFQVVE 1869
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = -1
Query: 627 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 448
S + TGS + PE +P T SV V+ S +LG ++
Sbjct: 421 SSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGS----SLGTQSTNSS 476
Query: 447 FNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV 295
+ S L P S +S LTS P P + SS S+ T Q+ S++
Sbjct: 477 PSPS---SLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSL 524
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = -1
Query: 627 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 448
S + TGS + PE +P T SV V+ S +LG ++
Sbjct: 628 SSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGS----SLGTQSTNSS 683
Query: 447 FNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV 295
+ S L P S +S LTS P P + SS S+ T Q+ S++
Sbjct: 684 PSPS---SLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSL 731
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = -1
Query: 627 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 448
S + TGS + PE +P T SV V+ S +LG ++
Sbjct: 628 SSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGS----SLGTQSTNSS 683
Query: 447 FNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV 295
+ S L P S +S LTS P P + SS S+ T Q+ S++
Sbjct: 684 PSPS---SLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSL 731
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 298 CPEQLLDSLLRRHHADRHQ*ERLQRRVLQVAFQTVKSHLC 179
CP D +R +H RL+R +L A KSHLC
Sbjct: 5041 CPVAGCDCRCQRSKQTKHLKARLRRHMLLSANMRAKSHLC 5080
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 383 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 475
D+VK +T E M GNM + RLD+ P+
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 387 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNS 283
SSP L++SS +PS T +S Q QS V NNS
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNS 866
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 387 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNS 283
SSP L++SS +PS T +S Q QS V NNS
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNS 866
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 320 VDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIRE 493
+D+ + E L K KG+E+ R AEA G ++ +KKR++ + + GQIR+
Sbjct: 1766 IDTELASHEPQVSLVKL--KGEELLRSAAEAGVG----EDQIKKRMEDLEQSWGQIRD 1817
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 113 PQSVNKIEVNSIIIVSLL-GEEATEMALYSLKSNLQYATLKTLSLVSISVM 262
P+ N++E+ +II S+L G T + + S++S L+ +++ +IS+M
Sbjct: 134 PRGRNRLELVGVIICSILMGISNTLLVMESIRSILEGDINPVMNITTISIM 184
>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
protein Y51H7C.11 protein.
Length = 1058
Score = 27.9 bits (59), Expect = 7.9
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Frame = +2
Query: 296 TADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMT--FQEALKKRLDIIR 469
+AD V F VDS V D ++E ++ K L + N+T + E +KK L I
Sbjct: 295 SADDVEF-VDS-VEDDVDVEEYSQLFDVNLVWKNLN---LASNLTKNYMERMKKELTICY 349
Query: 470 PNVGQIRE----FIEKFPV--------RLTPGITELVKELHERGV 568
P +GQ+ FIEK PV RL I++L + L E G+
Sbjct: 350 PLLGQVYAFDPIFIEKLPVFAHYDHVARLHINISQLAEHLVEFGI 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,125,683
Number of Sequences: 27780
Number of extensions: 298373
Number of successful extensions: 1093
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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