Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M23
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   5.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
 Frame = -2

Query: 108 YKSYYIIINRDVSRRARPRHC--FILKF--LQRLL 16
           +K  Y +IN  ++ R  P++C  F+++   L RLL
Sbjct: 191 FKQRYQLINEQMAVRINPKNCASFVIEVRKLSRLL 225


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 519 KSQLFYLQIFITTYIL 472
           KS  FY   +IT+Y L
Sbjct: 52  KSDYFYFSFYITSYTL 67


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 519 KSQLFYLQIFITTYIL 472
           KS  FY   +IT+Y L
Sbjct: 52  KSDYFYFSFYITSYTL 67


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 67  STNVSIYYNIV*FIVSEYYC*LNRLTLFVENLV 165
           +TN+ I    V ++V+ + C + +  +FVE L+
Sbjct: 351 TTNIIILGLNVVYVVTAWICAITKRDMFVEFLL 383


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 67  STNVSIYYNIV*FIVSEYYC*LNRLTLFVENLV 165
           +TN+ I    V ++V+ + C + +  +FVE L+
Sbjct: 76  TTNIIILGLNVVYVVTAWICAITKRDMFVEFLL 108


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -3

Query: 323 YNICLRSRVSTVVVE 279
           YN+C R R ++++++
Sbjct: 401 YNVCFRPRNNSILIK 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,155
Number of Sequences: 336
Number of extensions: 2150
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)