Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M23
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001333-1|AAN71088.1|  471|Drosophila melanogaster AT19445p pro...    29   5.4  
AE014297-2239|AAF55340.1|  460|Drosophila melanogaster CG12783-P...    29   5.4  

>BT001333-1|AAN71088.1|  471|Drosophila melanogaster AT19445p
           protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -2

Query: 501 LQIFITTYI----LCVSLVVCSCQIAYSKNLISS 412
           L +F+ TY+    LC+SL+ C C  A+   L+ S
Sbjct: 403 LLVFVPTYLRGKALCISLMWCRCGAAFGAMLVGS 436


>AE014297-2239|AAF55340.1|  460|Drosophila melanogaster CG12783-PA
           protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -2

Query: 501 LQIFITTYI----LCVSLVVCSCQIAYSKNLISS 412
           L +F+ TY+    LC+SL+ C C  A+   L+ S
Sbjct: 403 LLVFVPTYLRGKALCISLMWCRCGAAFGAMLVGS 436


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,387,255
Number of Sequences: 53049
Number of extensions: 341319
Number of successful extensions: 578
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)