Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M21
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5KAT7 Cluster: Putative uncharacterized protein; n=2; ... 47 5e-04
UniRef50_P40086 Cluster: Cytochrome c oxidase assembly protein C... 44 0.004
UniRef50_A5DKK4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.060
UniRef50_Q9W1F5 Cluster: CG3803-PA; n=5; Endopterygota|Rep: CG38... 40 0.079
UniRef50_UPI000058454A Cluster: PREDICTED: similar to cytochrome... 39 0.10
UniRef50_Q22251 Cluster: Putative uncharacterized protein; n=2; ... 38 0.24
UniRef50_A7PG90 Cluster: Chromosome chr6 scaffold_15, whole geno... 37 0.56
UniRef50_A5Y0M4 Cluster: Putative cytochrome c oxidase assembly ... 35 2.3
UniRef50_A0Q3G7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q5KHR7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q7KZN9 Cluster: Cytochrome c oxidase assembly protein C... 34 3.0
UniRef50_Q9FKT8 Cluster: Similarity to cytochrome oxidase assemb... 34 3.9
UniRef50_Q3KZA7 Cluster: SJCHGC04140 protein; n=1; Schistosoma j... 34 3.9
UniRef50_A3Y5R2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q4MZC9 Cluster: Cytochrome c oxidase assembly protein, ... 33 6.9
UniRef50_Q122R1 Cluster: Two component transcriptional regulator... 33 9.1
UniRef50_A2SGF9 Cluster: Nitrate/nitrite response regulator; n=1... 33 9.1
UniRef50_Q5CTK9 Cluster: Putative uncharacterized protein; n=2; ... 33 9.1
>UniRef50_Q5KAT7 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 548
Score = 46.8 bits (106), Expect = 5e-04
Identities = 33/115 (28%), Positives = 54/115 (46%)
Frame = +2
Query: 212 FISIPNSCTAMLNLSRLCRCKQSLSAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNIL 391
F +IPN T+ N L + + +Q+ LL F +I I KTHR+N+
Sbjct: 338 FANIPNGATS--NFGTLVIKGLNFTTMQTTLLQIPYGAFIAFMIYMAIYVNHKTHRFNV- 394
Query: 392 GRLSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGYI 556
R L + + +++ + KP S+ +GY+ G S VF + L +VSG +
Sbjct: 395 -RTLLMACVTVLTVVGFAMMAFTKPTASRLIGYYFTGSSNAVF-VLALSLVSGNV 447
>UniRef50_P40086 Cluster: Cytochrome c oxidase assembly protein
COX15; n=10; Saccharomycetales|Rep: Cytochrome c oxidase
assembly protein COX15 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 486
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 281 LSAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTP 460
L+ S+L S N RQ I KT YN +S+ S+ + +S
Sbjct: 16 LTRTSSRLAWQSIGASRNISTIRQQIR--KTQLYNFKKTVSIRPFSLSSPVFKPHVASES 73
Query: 461 KP-----KTSKAVGYWLLGCSGMVFTAVVLG 538
P KTSK V YWL+G SG+VF VVLG
Sbjct: 74 NPIESRLKTSKNVAYWLIGTSGLVFGIVVLG 104
>UniRef50_A5DKK4 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 495
Score = 39.9 bits (89), Expect = 0.060
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 332 NSIISRQIITTT---KTHRYNIL-GRLSLSSTIKSN--SIIMRFCSSTPKPK-TSKAVGY 490
NS++S++ +TT K +L GR + ++ + ++ S+ F P T K +GY
Sbjct: 50 NSVVSKRSLTTNLGPKNAGKGLLKGRRTYTTLLVNSKESVTKTFPKIKPSNIITDKVIGY 109
Query: 491 WLLGCSGMVFTAVVLG 538
WL+G SG++F VVLG
Sbjct: 110 WLVGTSGLIFGIVVLG 125
>UniRef50_Q9W1F5 Cluster: CG3803-PA; n=5; Endopterygota|Rep:
CG3803-PA - Drosophila melanogaster (Fruit fly)
Length = 393
Score = 39.5 bits (88), Expect = 0.079
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 464 PKTSKAVGYWLLGCSGMVFTAVVLGMVS 547
PK+ K VG W LG SGMVF AV LG V+
Sbjct: 42 PKSDKTVGRWFLGVSGMVFVAVGLGGVT 69
>UniRef50_UPI000058454A Cluster: PREDICTED: similar to cytochrome
oxidase assembly factor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome oxidase
assembly factor - Strongylocentrotus purpuratus
Length = 435
Score = 39.1 bits (87), Expect = 0.10
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 452 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVS 547
+T P+ K VG WLLGC GM+ VVLG V+
Sbjct: 85 NTISPRAEKIVGAWLLGCCGMIAGTVVLGGVT 116
>UniRef50_Q22251 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 395
Score = 37.9 bits (84), Expect = 0.24
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 467 KTSKAVGYWLLGCSGMVFTAVVLGMVS 547
K+ K +G+WL+GC+GM + AV LG V+
Sbjct: 46 KSRKRIGWWLMGCAGMCYGAVALGGVT 72
>UniRef50_A7PG90 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 562
Score = 36.7 bits (81), Expect = 0.56
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Frame = +2
Query: 233 CTAMLNLSRLCRCKQSLSAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLSS 412
C ++ LSR+ + +++ V L + SI+S T K +ILG S
Sbjct: 144 CCSLEGLSRILKLSPNIAGVTLLSLGNGAPDLFASIVSFMGDETEKVGLNSILGGAFFVS 203
Query: 413 TIKSNSIIMRFCSSTPKPKTSK---AVGYWLLGCSGMVFTAVVLGMVSGY-IIMLYSIYY 580
+I I + C S P + S V ++LL + + ++LG ++ + I +S+Y+
Sbjct: 204 SIVVGIISISVCHSRPSIERSSFIWDVTFFLLSLA-CLLVIIMLGKINLWGAISFFSLYF 262
Query: 581 IVNLILNTS 607
I L ++TS
Sbjct: 263 IYVLFISTS 271
>UniRef50_A5Y0M4 Cluster: Putative cytochrome c oxidase assembly
protein; n=1; Starmerella bombicola|Rep: Putative
cytochrome c oxidase assembly protein - Starmerella
bombicola
Length = 485
Score = 34.7 bits (76), Expect = 2.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 458 PKPKTSKAVGYWLLGCSGMVFTAVVLG 538
P+ +SK+V YWLL C VF VVLG
Sbjct: 94 PRMVSSKSVAYWLLFCGAAVFGIVVLG 120
>UniRef50_A0Q3G7 Cluster: Putative uncharacterized protein; n=1;
Clostridium novyi NT|Rep: Putative uncharacterized
protein - Clostridium novyi (strain NT)
Length = 529
Score = 34.3 bits (75), Expect = 3.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 199 KILSIHQYT*QLYSYAEPLTTLSM*AVSKCSAK*TPGVISKWLQQQYYFKANYHNY---- 366
K + + ++ +L+ Y +P+ +S S C K IS W QQQ + + NY
Sbjct: 413 KAICLEDHSKELFGYNKPVKCISE---SSCIFKNAKDFISNWEQQQLFDEGKNPNYNLDL 469
Query: 367 KNAQI*HPRKV-KSKQHNKIK 426
KN +P V K K H IK
Sbjct: 470 KNVMRYYPESVPKEKYHAPIK 490
>UniRef50_Q5KHR7 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 756
Score = 34.3 bits (75), Expect = 3.0
Identities = 28/102 (27%), Positives = 45/102 (44%)
Frame = +2
Query: 230 SCTAMLNLSRLCRCKQSLSAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLS 409
S T+ S ++S+++ SK S+ S S SR + +T TH + + S
Sbjct: 131 STTSSAKSSAASSIRESVASSSSKSSSSAIKSSSTSTASRSTVHSTSTHSSST--STTHS 188
Query: 410 STIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVL 535
++I S R SST KP T+ ++ S + TA L
Sbjct: 189 TSIVHTSSTNRELSSTAKPSTTSHSSSAIISSSSISSTAAAL 230
>UniRef50_Q7KZN9 Cluster: Cytochrome c oxidase assembly protein
COX15 homolog; n=23; Eumetazoa|Rep: Cytochrome c oxidase
assembly protein COX15 homolog - Homo sapiens (Human)
Length = 410
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 452 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVS 547
S P + VG WLL CSG V AV+LG V+
Sbjct: 59 SLPSKAAERVVGRWLLVCSGTVAGAVILGGVT 90
>UniRef50_Q9FKT8 Cluster: Similarity to cytochrome oxidase assembly
factor; n=8; Viridiplantae|Rep: Similarity to cytochrome
oxidase assembly factor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 457
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 368 KTHRYNILGRLSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVLGMVS 547
K ++ R+S ++I S S T P+ K VG WL G + VF+ VVLG V+
Sbjct: 61 KGQNASMFRRMSTVASISSESKEGLKLLVTGGPQAQKWVGIWLFGSAAWVFSMVVLGGVT 120
>UniRef50_Q3KZA7 Cluster: SJCHGC04140 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04140 protein - Schistosoma
japonicum (Blood fluke)
Length = 216
Score = 33.9 bits (74), Expect = 3.9
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 320 NGFSNSIISRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPK----PKTSKAVG 487
NGF NS+ + T T YN+L + +T + N + +R S K KTS A
Sbjct: 66 NGFVNSVHEK---TVTPMWFYNVLQSVIRQNTERRNILKVRVVSEDDKLIEQQKTSSATA 122
Query: 488 YWLLGCSGMVFTAVVLG 538
Y LLG ++ + LG
Sbjct: 123 YSLLGIEWSIWRDIELG 139
>UniRef50_A3Y5R2 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 479
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 278 SLSAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLS 403
++SAV++K + SS F ++ IIT KT NIL RL+
Sbjct: 123 NISAVENKRVFSSSVKFRQEVVGHVIITLDKTPTQNILSRLN 164
>UniRef50_Q4MZC9 Cluster: Cytochrome c oxidase assembly protein,
putative; n=2; Theileria|Rep: Cytochrome c oxidase
assembly protein, putative - Theileria parva
Length = 435
Score = 33.1 bits (72), Expect = 6.9
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 410 STIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVLG 538
ST+ S ++ S K K VG+WL+GCSG+ TA ++G
Sbjct: 67 STLNSTQFVLE--SPIVKRGFEKKVGWWLMGCSGL--TAFIMG 105
>UniRef50_Q122R1 Cluster: Two component transcriptional regulator,
LuxR family; n=7; Burkholderiales|Rep: Two component
transcriptional regulator, LuxR family - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 236
Score = 32.7 bits (71), Expect = 9.1
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +2
Query: 281 LSAVQSKLLVSSRNGFSNSIISRQII---TTTKTHRYNILGRLSLSSTIKS 424
LSA + ++L +G SN +I+R++ TT K H +IL +L LSS +++
Sbjct: 176 LSAREREVLARISHGDSNKVIARKLDIAETTVKIHVQHILRKLQLSSRVQA 226
>UniRef50_A2SGF9 Cluster: Nitrate/nitrite response regulator; n=1;
Methylibium petroleiphilum PM1|Rep: Nitrate/nitrite
response regulator - Methylibium petroleiphilum (strain
PM1)
Length = 240
Score = 32.7 bits (71), Expect = 9.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 281 LSAVQSKLLVSSRNGFSNSIISRQI---ITTTKTHRYNILGRLSLSSTIKSNSIIMRFCS 451
LSA + + L G SN +I+RQ+ T K H N+L +L L S + + + R +
Sbjct: 177 LSARERETLALVAEGCSNKLIARQLGIAEATVKIHVQNLLRKLGLESRVHAAAWYARLGT 236
Query: 452 STPK 463
S P+
Sbjct: 237 SKPQ 240
>UniRef50_Q5CTK9 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 2319
Score = 32.7 bits (71), Expect = 9.1
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +2
Query: 215 ISIPNSCTAMLNLSRLCRCKQSLSAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILG 394
+S+ N T+ LN +Q + +L++ N +S+I Q++ +TH +I G
Sbjct: 435 VSMQNGETSNLNQMT---AEQICKELGIELILKKHNVKYSSLIFFQLLKK-QTHDKSIFG 490
Query: 395 RLSLSS-TIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGYII 559
R+S SS T+ S I + + S PK S + W G VF+ G VS +II
Sbjct: 491 RVSTSSYTLPSGKIFLPY-SKYGYPKISSNLEIW--ASVGKVFSD---GTVSSFII 540
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,854,528
Number of Sequences: 1657284
Number of extensions: 9962226
Number of successful extensions: 25604
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25593
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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