Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M21
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071468-1|AAL49090.1|  393|Drosophila melanogaster RE54691p pro...    40   0.004
AE013599-3747|AAF47112.1|  393|Drosophila melanogaster CG3803-PA...    40   0.004
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P...    30   3.5  
AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein.     29   4.7  
AE014296-1324|AAX52755.1|   87|Drosophila melanogaster CG7391-PE...    29   4.7  
AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD...    29   4.7  
AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC...    29   4.7  
AE014296-3494|AAO41284.2|  437|Drosophila melanogaster CG10508-P...    29   6.2  
AE014134-584|AAF51125.4|  436|Drosophila melanogaster CG33282-PA...    29   8.2  

>AY071468-1|AAL49090.1|  393|Drosophila melanogaster RE54691p
           protein.
          Length = 393

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +2

Query: 464 PKTSKAVGYWLLGCSGMVFTAVVLGMVS 547
           PK+ K VG W LG SGMVF AV LG V+
Sbjct: 42  PKSDKTVGRWFLGVSGMVFVAVGLGGVT 69


>AE013599-3747|AAF47112.1|  393|Drosophila melanogaster CG3803-PA
           protein.
          Length = 393

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = +2

Query: 464 PKTSKAVGYWLLGCSGMVFTAVVLGMVS 547
           PK+ K VG W LG SGMVF AV LG V+
Sbjct: 42  PKSDKTVGRWFLGVSGMVFVAVGLGGVT 69


>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
           protein.
          Length = 1317

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 329 SNSIISRQIITTTKTHRYNILGRLSLSSTIK-SNSIIMRFCSSTPK 463
           SN      + ++ KT+ YN   +  +S T+  SNSI  RFC + PK
Sbjct: 476 SNVSNEHSVFSSNKTNNYNDYSK-PVSKTLSISNSIWERFCDNKPK 520


>AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein.
          Length = 1027

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 318 RDDTRSLLCTALRDCLHRQSRERFSIAVQLLGILMNRQNLK 196
           +DDT+S LC   R+   ++ R++F+  V  L  L++  + K
Sbjct: 8   KDDTKSFLCRKSRNLSEKKRRDQFNSLVDDLSALISTSSRK 48


>AE014296-1324|AAX52755.1|   87|Drosophila melanogaster CG7391-PE,
           isoform E protein.
          Length = 87

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 318 RDDTRSLLCTALRDCLHRQSRERFSIAVQLLGILMNRQNLK 196
           +DDT+S LC   R+   ++ R++F+  V  L  L++  + K
Sbjct: 8   KDDTKSFLCRKSRNLSEKKRRDQFNSLVNDLSALISTSSRK 48


>AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD,
           isoform D protein.
          Length = 1027

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 318 RDDTRSLLCTALRDCLHRQSRERFSIAVQLLGILMNRQNLK 196
           +DDT+S LC   R+   ++ R++F+  V  L  L++  + K
Sbjct: 8   KDDTKSFLCRKSRNLSEKKRRDQFNSLVNDLSALISTSSRK 48


>AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC,
           isoform C protein.
          Length = 1027

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -3

Query: 318 RDDTRSLLCTALRDCLHRQSRERFSIAVQLLGILMNRQNLK 196
           +DDT+S LC   R+   ++ R++F+  V  L  L++  + K
Sbjct: 8   KDDTKSFLCRKSRNLSEKKRRDQFNSLVNDLSALISTSSRK 48


>AE014296-3494|AAO41284.2|  437|Drosophila melanogaster CG10508-PC,
           isoform C protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
 Frame = +2

Query: 284 SAVQSKLLVSSRNGFSNSIISRQIITT---TKT----HRYNILGRLSLSSTIKSNSIIMR 442
           +++ S  LVSS    S+SI  R    +   TKT    HR + LG    S + +  SII R
Sbjct: 290 ASMTSSSLVSSAQSNSSSIARRPAFESRARTKTDSLKHRQHSLGNSHNSESAEFQSIIER 349

Query: 443 FCSSTPKPKTSKAVGYWLL 499
             S  P  + SK     LL
Sbjct: 350 MASLGPNSQLSKGADENLL 368


>AE014134-584|AAF51125.4|  436|Drosophila melanogaster CG33282-PA
           protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 506 SGMVFTAVVLGMVSGYIIMLYSIYYIV 586
           + MV  +V LG+++GYI+  Y  Y++V
Sbjct: 126 TSMVMLSVDLGILAGYILSTYLAYHVV 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,263,135
Number of Sequences: 53049
Number of extensions: 447433
Number of successful extensions: 1039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)