Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M21
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 30 1.9
U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 29 2.5
U42836-2|ABC48244.1| 278|Caenorhabditis elegans Hypothetical pr... 29 4.3
U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54218-3|CAA90955.2| 654|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL132902-5|CAB81990.1| 289|Caenorhabditis elegans Hypothetical ... 28 7.5
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70757-2|CAA94798.1| 611|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 27 9.9
DQ178244-1|ABA18183.1| 521|Caenorhabditis elegans putative sulf... 27 9.9
AY954525-1|AAX34433.1| 611|Caenorhabditis elegans anion transpo... 27 9.9
AY887917-1|AAX34429.1| 611|Caenorhabditis elegans anion transpo... 27 9.9
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 27 9.9
>Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical
protein T06D8.5 protein.
Length = 395
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 467 KTSKAVGYWLLGCSGMVFTAVVLGMVS 547
K+ K +G+WL+GC+GM + AV LG V+
Sbjct: 46 KSRKRIGWWLMGCAGMCYGAVALGGVT 72
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 344 SRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPK 463
S + +R N G +SL+S + N ++R C ++PK
Sbjct: 747 SNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK 786
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 344 SRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPK 463
S + +R N G +SL+S + N ++R C ++PK
Sbjct: 467 SNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK 506
>U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical
protein R05H11.1 protein.
Length = 476
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 322 WLQQQYYFKANYHNYKNAQI*HPRKVKSKQHNKIKQ-YYNAIL 447
W Y + + NY + HP++VKS Q + I Q Y N +L
Sbjct: 103 WNNSYYLKSSKFQNYMFCKRSHPKEVKSLQPSTIPQNYINGML 145
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 398 LSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVV 532
LS+SS + S PK KA+ W+ C G +F +++
Sbjct: 298 LSVSSLMALTFQFGNIVKSLPKASYVKAIDIWMFSCVGFIFFSLI 342
>U42836-2|ABC48244.1| 278|Caenorhabditis elegans Hypothetical
protein T21F2.1b protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 398 LSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGY 553
L +SS + + P+ KA+ W+ GC G +F ++V V G+
Sbjct: 110 LGVSSLMALTFQFGNIVKNLPRVSYVKALDIWMFGCVGFIFLSLVELAVVGF 161
>U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical
protein T21F2.1a protein.
Length = 497
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 398 LSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGY 553
L +SS + + P+ KA+ W+ GC G +F ++V V G+
Sbjct: 329 LGVSSLMALTFQFGNIVKNLPRVSYVKALDIWMFGCVGFIFLSLVELAVVGF 380
>Z54218-3|CAA90955.2| 654|Caenorhabditis elegans Hypothetical
protein F37B12.2 protein.
Length = 654
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 315 LEMASATVLFQGKLSQLQKRTDITS 389
L +++AT +F+GKLS + R DI S
Sbjct: 282 LALSAATPIFRGKLSNVDSRWDIIS 306
>AL132902-5|CAB81990.1| 289|Caenorhabditis elegans Hypothetical
protein Y71A12B.5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 484 WILATRMQWYGLHCCSTRYGIWI 552
++ AT W GL T YG+WI
Sbjct: 173 FVAATAQPWLGLQSNFTTYGVWI 195
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 284 SAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLSSTI 418
S+ K+ +S G N + +I TT+THRY IL +S I
Sbjct: 319 SSKDRKMKMSETEGRMNDLTV--VIDTTQTHRYTILKDMSFEIPI 361
>Z70757-2|CAA94798.1| 611|Caenorhabditis elegans Hypothetical
protein ZK287.2 protein.
Length = 611
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 491 WLLGCSGMVFTAVVLGMVSGYIIMLYSI 574
WL+ C +FT V G+V LY++
Sbjct: 441 WLVACLSTIFTDVTTGLVISLAFSLYTL 468
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 392 GRLSLSSTIKSNSIIMRFCSSTPKPKTS--KAVGYWLLGCSGMVFTAVVLGMVSGYII 559
GR+SLS T + P+ S KA+ W+ C VF+A++ V Y +
Sbjct: 278 GRVSLSITTLLTLATQSSAARMALPQASDVKAIDVWMGTCMAFVFSAMIEFTVVNYCV 335
>DQ178244-1|ABA18183.1| 521|Caenorhabditis elegans putative sulfate
transporter prestinprotein.
Length = 521
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 491 WLLGCSGMVFTAVVLGMVSGYIIMLYSI 574
WL+ C +FT V G+V LY++
Sbjct: 351 WLVACLSTIFTDVTTGLVISLAFSLYTL 378
>AY954525-1|AAX34433.1| 611|Caenorhabditis elegans anion
transporter SULP-8a protein.
Length = 611
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 491 WLLGCSGMVFTAVVLGMVSGYIIMLYSI 574
WL+ C +FT V G+V LY++
Sbjct: 441 WLVACLSTIFTDVTTGLVISLAFSLYTL 468
>AY887917-1|AAX34429.1| 611|Caenorhabditis elegans anion
transporter SULP-8b protein.
Length = 611
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 491 WLLGCSGMVFTAVVLGMVSGYIIMLYSI 574
WL+ C +FT V G+V LY++
Sbjct: 441 WLVACLSTIFTDVTTGLVISLAFSLYTL 468
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 284 SAVQSKLLVSSRNGFSNSIISRQIITTTKTHRYNILGRLSLSSTI 418
S+ K+ +S G N + +I TT+THRY IL +S I
Sbjct: 319 SSKDRKMKMSETEGRMNDLTV--VIDTTQTHRYTILKDMSFEIPI 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,486,111
Number of Sequences: 27780
Number of extensions: 247863
Number of successful extensions: 659
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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