Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M20
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.8  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    20   9.6  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 108 GLLSAFVHLLHCTSEHGFQAPIHP 37
           GLLSA+  LLH  S+     P  P
Sbjct: 421 GLLSAYGELLHALSDKPELRPFEP 444


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 186 ATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDT 305
           +TTP  E +R  +  S+   K   +TP P +    +S  T
Sbjct: 405 STTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTST 444



 Score = 22.2 bits (45), Expect = 2.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 18  AGWNKNWDE 44
           +GW K WDE
Sbjct: 321 SGWTKKWDE 329


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTS 174


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 86  STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 130


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 192 TPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +P      A+TP SS+ +    + P PA TT + S  + A + S
Sbjct: 10  SPPPAPQSAATPISSSGMTSPAAAPPPA-TTSSGSPASVASNAS 52


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 189 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 323
           +TP+   +  S+  +S     +     PA +T +Q+  +PA S S
Sbjct: 130 STPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 78  HCTSEHGFQAPIHPNFC 28
           HC  +HG+ A   P+ C
Sbjct: 106 HCPRKHGYFAHEEPHIC 122


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 108 GLLSAFVHLLHC 73
           G+ S+FVH  HC
Sbjct: 29  GINSSFVHKEHC 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,819
Number of Sequences: 336
Number of extensions: 1454
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)