Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M20
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 0.52
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.52
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 6.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 6.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 6.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 6.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 6.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 6.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.5
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 8.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.5
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.6 bits (51), Expect = 0.52
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 201 REESRASTPASSTQVKESD--STPAPAKTTKTQSKDTPADSGSDQPKKK 341
R + ST + ++ + TP P + + + D+P+DSG + +K
Sbjct: 540 RRANSGSTSSGDDELHRASLSKTPQPPQCPRFRKLDSPSDSGIESGTEK 588
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 0.52
Identities = 16/74 (21%), Positives = 29/74 (39%)
Frame = +3
Query: 60 RVLKYNEANVQRQKEVQRAHSAQPXXXXXXPAKGRKSDAAVAATTPAREESRASTPASST 239
R + + QRQ++ Q +P + ++ A + ASTPA+ T
Sbjct: 161 RPYQQQQQQQQRQQQRQEERRLRPDEIKVEVGEDEFANGGAARDESKAGSTDASTPATVT 220
Query: 240 QVKESDSTPAPAKT 281
+ + PA + T
Sbjct: 221 TTGATTTLPAASAT 234
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 131 WLCGMSSLDFFLPLYICFI 75
WLCG+SS+ +P Y+ +I
Sbjct: 533 WLCGLSSM-LCIPGYMIYI 550
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 131 WLCGMSSLDFFLPLYICFI 75
WLCG+SS+ +P Y+ +I
Sbjct: 586 WLCGLSSM-LCIPGYMIYI 603
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 1.6
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 213 RASTPASSTQVK-ESDSTPAPAKTTKTQSKDTPAD 314
+A S +V+ ++D P P T K + DTP D
Sbjct: 688 KAFAQGSDARVECKADGFPKPQVTWKKAAGDTPGD 722
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.0 bits (42), Expect = 6.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 402 KIKIPEXLKVWL 437
KI IP+ +K+W+
Sbjct: 387 KITIPKEMKIWI 398
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -3
Query: 173 IRFPTLCGSFLSFSWLCGMSSLDFFLPLY 87
+ +P G++ + S +C M ++ PLY
Sbjct: 185 VEYPPESGNYSADSAMCAMLTIYADFPLY 213
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 6.4
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEE 377
+R+ S K +S +T+K +S+D S +PK L+ +I +
Sbjct: 257 SRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIHNNN 316
Query: 378 QY 383
Y
Sbjct: 317 NY 318
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.4
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEE 377
+R+ S K +S +T+K +S+D S +PK L+ +I +
Sbjct: 268 SRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIHNNN 327
Query: 378 QY 383
Y
Sbjct: 328 NY 329
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.4
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEE 377
+R+ S K +S +T+K +S+D S +PK L+ +I +
Sbjct: 268 SRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIHNNN 327
Query: 378 QY 383
Y
Sbjct: 328 NY 329
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 6.4
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEE 377
+R+ S K +S +T+K +S+D S +PK L+ +I +
Sbjct: 257 SRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLLNNTIHNNN 316
Query: 378 QY 383
Y
Sbjct: 317 NY 318
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPK 335
+R+ S K +S KT+K +S+D S +PK
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERERSKEPK 80
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPK 335
+R+ S K +S KT+K +S+D S +PK
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERERSKEPK 80
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPK 335
+R+ S K +S KT+K +S+D S +PK
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERERSKEPK 80
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPK 335
+R+ S K +S KT+K +S+D S +PK
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERERSKEPK 80
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPK 335
+R+ S K +S KT+K +S+D S +PK
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERERSKEPK 80
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +3
Query: 198 AREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPK 335
+R+ S K +S KT+K +S+D S +PK
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRKTSKERSRDRTERERSKEPK 80
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 20.6 bits (41), Expect = 8.5
Identities = 6/25 (24%), Positives = 14/25 (56%)
Frame = +3
Query: 6 LIHYAGWNKNWDEWVPESRVLKYNE 80
LI + W+ ++ W P S ++ ++
Sbjct: 262 LIKWKNWDLKYNTWEPISNLINCSD 286
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 59 PCSEVQ*SKCTKAERSPKSSFRTT 130
P +E +KC ER+P +T+
Sbjct: 346 PSTETLNTKCNTLERTPSKCSQTS 369
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 8.5
Identities = 11/57 (19%), Positives = 25/57 (43%)
Frame = +3
Query: 186 ATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLD 356
AT + S +TP +V++ + + + + D P ++ ++ K+ LD
Sbjct: 277 ATPKGSKCSMITTPEIKKEVEDMEYDDIKTELSTGMNDDIPPETEEEEENDKKLDLD 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,054
Number of Sequences: 438
Number of extensions: 1527
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -