Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M19
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 177 7e-45
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 176 1e-44
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 166 1e-41
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 131 5e-31
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 52 3e-07
11_01_0104 - 781471-781888,781994-782101,782195-782511 34 0.075
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 34 0.075
12_01_0104 - 816185-816602,816710-816817,816910-817037 32 0.40
09_02_0390 + 8465652-8466059 31 0.70
10_01_0204 + 2199778-2200835,2201212-2201311 30 1.2
04_04_1273 - 32307273-32307569,32307659-32307791,32307874-323081... 30 1.6
04_01_0463 - 5985963-5986001,5986147-5986458 30 1.6
11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084 29 2.1
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 2.1
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 29 3.7
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 29 3.7
09_06_0081 + 20745627-20748144,20748211-20748308 28 5.0
04_04_1272 - 32288142-32288456,32288538-32288670,32288780-322890... 28 5.0
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 28 6.5
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 27 8.7
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 27 8.7
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 27 8.7
11_06_0008 - 19181933-19182009,19185148-19185691 27 8.7
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 27 8.7
03_06_0343 + 33274329-33274981,33275197-33276121 27 8.7
03_02_0174 + 6142472-6142849 27 8.7
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 177 bits (430), Expect = 7e-45
Identities = 80/148 (54%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Frame = +1
Query: 106 RAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSH 282
+A+AVL S+E ++G I F+Q DG V G ++GL PG +GFHVH GD + GC+STG H
Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 283 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 462
FNP K+HG P D NRH GDLGN+ + + +++ D QI L+G H IIGRAVV+H
Sbjct: 63 FNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADP 122
Query: 463 DDYGKSDHPDSRKTGNAGGRVACGVIGI 546
DD GK H S+ TGNAGGRVACG+IG+
Sbjct: 123 DDLGKGGHELSKTTGNAGGRVACGIIGL 150
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 176 bits (429), Expect = 1e-44
Identities = 81/151 (53%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Frame = +1
Query: 97 TPSRAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVST 273
T +A+ VL S+E ++G I F Q DG V G ++GL PG +GFH+H GD + GC+ST
Sbjct: 118 TMVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMST 177
Query: 274 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 453
G H+NP K+HG P D RH GDLGNV E+ + I +VD QI L+GP+ IIGRAVV+H
Sbjct: 178 GPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVH 237
Query: 454 EKADDYGKSDHPDSRKTGNAGGRVACGVIGI 546
DD GK H S+ TGNAGGRVACG+IG+
Sbjct: 238 ADPDDLGKGGHELSKTTGNAGGRVACGIIGL 268
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 166 bits (403), Expect = 1e-41
Identities = 76/148 (51%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Frame = +1
Query: 106 RAIAVLS-TETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSH 282
+A+AVL T + G +T TQ G V +TGL PG +GFH+HE GD + GC+STG H
Sbjct: 53 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPH 112
Query: 283 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 462
FNP + HG P D RH GDLGN+V + + +VD QI LSGP+ ++GRA V+HE
Sbjct: 113 FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELE 172
Query: 463 DDYGKSDHPDSRKTGNAGGRVACGVIGI 546
DD GK H S TGNAGGR+ACGV+G+
Sbjct: 173 DDLGKGGHELSLSTGNAGGRLACGVVGL 200
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 131 bits (316), Expect = 5e-31
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = +1
Query: 154 FTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHPNDVNRH 333
F G V+G +TGL PG +GFH+H GD + GC STG HFNP +K HG P+D RH
Sbjct: 30 FQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNSTGPHFNPHNKSHGAPSDDERH 89
Query: 334 VGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGK 477
VGDLGN+V +++ + I + D QISLSGPH I+GRAVV+H +DD G+
Sbjct: 90 VGDLGNIVANKDGVADIFIKDLQISLSGPHSILGRAVVVHADSDDLGR 137
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/121 (28%), Positives = 60/121 (49%)
Frame = +1
Query: 103 SRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTGSH 282
S A+A I G + QV V+ +GL PG++G+ ++E GDL+ G STG
Sbjct: 165 SAAVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKV 224
Query: 283 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 462
+NP D+ N+ +GDLG + E ++ +++ + +IGR++ L+
Sbjct: 225 YNP--SDYRS----NKPLGDLGTLEAGEKGEAQFSASKEKLKVV---DLIGRSIALYATE 275
Query: 463 D 465
D
Sbjct: 276 D 276
>11_01_0104 - 781471-781888,781994-782101,782195-782511
Length = 280
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 45 TNIPGRDRSGDGSSRLHHAVSRHCR-SIHRND*RQHHVHPGSRW-EGPRSGGYHWAASG* 218
TN+ G R GD S +H + + S+ + R++ H GS + P + G+ W G
Sbjct: 75 TNLVGGKRKGDKHSMDNHNLEEEAKESVSKR--RKNAEHTGSTVAQAPHNDGHQWRKYGQ 132
Query: 219 IWLSRA 236
W+SRA
Sbjct: 133 KWISRA 138
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 34.3 bits (75), Expect = 0.075
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 178 VHVQGGITGLPPGEYGFHVHEKGDLSGGCVSTG 276
+ V+ ++GL P +GFHVH G + GC+ G
Sbjct: 37 ITVKENVSGLKPVLHGFHVHALGGTTNGCMRNG 69
>12_01_0104 - 816185-816602,816710-816817,816910-817037
Length = 217
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 45 TNIPGRDRSGDGSSRLHHAVSRHCR-SIHRND*RQHHVHPGSRW-EGPRSGGYHWAASG* 218
TN+ G R GD +H + + S+ + R++ H GS + P + G+ W G
Sbjct: 12 TNLVGGKRKGDKHIMDNHNLEEEAKESVSKR--RKNAEHTGSTVAQAPHNDGHQWRKYGQ 69
Query: 219 IWLSRA 236
W+SRA
Sbjct: 70 KWISRA 75
>09_02_0390 + 8465652-8466059
Length = 135
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 250 GRLSHARESHIHPEAAQ*YPPERGPSHLEPG 158
GRL H SH HP PP G S PG
Sbjct: 39 GRLCHRLRSHNHPSLLPTLPPRAGTSSTPPG 69
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 330 SRRRPWK--RGL*REPLQQDRPGRRPDLAIGSARHHRQGGGAPR 455
+R+RP + RG REP+ + A+G+AR R GGGA R
Sbjct: 27 TRKRPSRTSRGSQREPVGGAGRKEKAKSAVGAARAERWGGGAER 70
>04_04_1273 -
32307273-32307569,32307659-32307791,32307874-32308105,
32308220-32308436,32308594-32308718,32309416-32310757
Length = 781
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 130 LWIERQWRETAW*SRDEPSP 71
LW ++W TAW S D+PSP
Sbjct: 173 LWSGQEWFITAWRSADDPSP 192
>04_01_0463 - 5985963-5986001,5986147-5986458
Length = 116
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 390 GRRPDLAIGSARHHRQ----GGGAPRES**LWQE*PS-GLQEDRQRWRSSRLRCHRNSID 554
GRRP +A+ A R+ GG+ RES LW + + ED RWR C +
Sbjct: 45 GRRPSIALWMASKGRRVGISDGGSTRES--LWIDSATVDKGEDVMRWRPGVATCRQRRWR 102
Query: 555 LQIS 566
LQI+
Sbjct: 103 LQIN 106
>11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084
Length = 197
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +3
Query: 303 PRSSERCQPSRRRPWKRGL*REPLQQDRPGRRPDLAIGSARHHRQGG 443
PR S R + RRPW RG R L+ G RPD + + GG
Sbjct: 90 PRISGRQRGGGRRPWDRGRRRRRLEH---GGRPDPVVPNHMETGSGG 133
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 9 DGSQRENKNAASTNIPGRDRSGDGSSRLHHAVSRHCRSIHRND*RQHHVHPGSRWEGPRS 188
D S+++ K + RDR SS H SRH R + D H S EG +S
Sbjct: 805 DSSRKDRKYREDESRHSRDRCSRHSSSRSHRSSRHSREKYHGDTTDQHKSKKSE-EGSKS 863
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 536 TPQATRPPALPVFLESGWSLLP*SSAFSWSTTALP 432
T A +P A+P + W+ P +A W T A P
Sbjct: 249 TDAAAQPAAIPAQAGADWTAAPAPAAGGWDTAAAP 283
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +3
Query: 333 RRRPWKRGL*REPLQQDRP-----GRRPDLAIGSARHHRQGGG 446
RRRPW RG R + P GRRP G H + GG
Sbjct: 47 RRRPWSRGGGRAAPESTPPAKYARGRRPRRGSGGHAPHPESGG 89
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 533 PQATRPPALPVFLESGWSLLP*SSAFSWSTTALPMMPCGP 414
P+A+ PA PV GW++ P ++ +S+S + P
Sbjct: 591 PRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSAAP 630
>04_04_1272 -
32288142-32288456,32288538-32288670,32288780-32289020,
32289124-32289340,32289557-32289681,32290873-32292157
Length = 771
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 130 LWIERQWRETAW*SRDEPSP 71
LW +W T+W S D+PSP
Sbjct: 172 LWTGAEWDLTSWRSPDDPSP 191
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +1
Query: 247 DLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHG 426
DL GG +G P+H+ N N VG N V +N+ + S S G
Sbjct: 357 DLGGGATPSGHANVPKHQPTEVFNTTNAGVGQCSNSVAVDNNIQHSQTIPQDPSASHDFG 416
Query: 427 IIGRAV 444
+ R +
Sbjct: 417 GMTRII 422
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 349 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 501
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 444
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 349 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 501
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 444
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 349 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 501
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 444
>11_06_0008 - 19181933-19182009,19185148-19185691
Length = 206
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -2
Query: 533 PQATRPPALPVFLESGWSLLP*SSAFSWSTTAL 435
PQA PP LPV LE G P SS S ST L
Sbjct: 123 PQA--PPLLPVLLELGGLRAPVSSLASLSTRLL 153
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 349 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 501
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 573 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 623
>03_06_0343 + 33274329-33274981,33275197-33276121
Length = 525
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 53 SWPRSLWRRLITASPRRLAPLPFYPQKRLEATSRSPRFKMGRSTFRGV 196
S+ SLW ++ P+ L P+K+ E FK G+ R V
Sbjct: 233 SYMCSLWTEVVFKHPKTFETLAMDPEKKREIIDDLDMFKNGKEQHRRV 280
>03_02_0174 + 6142472-6142849
Length = 125
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +3
Query: 333 RRRPWKRGL*REPLQ-----QDRPGRRPDLAIGSARHHRQGGGA 449
RRRPW+RG R ++ D RRP G AR +GGGA
Sbjct: 53 RRRPWRRGGARGRVEVAAVLADERRRRP-WRRGGARGQGRGGGA 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,833,670
Number of Sequences: 37544
Number of extensions: 438966
Number of successful extensions: 1348
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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