Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M19
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.00 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.0  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.3  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 24   ENKNAASTNIPGRDRSGDGSSRLHHAVSRHCRSIHR 131
            + +N  S +  GR  +   +   HH V++HC +IHR
Sbjct: 1657 QQRNVISDSESGRLDTEMSTWGYHHNVNKHC-TIHR 1691


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 388 LVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 501
           ++D+ I LSG     G  V+LH       + +  D++K
Sbjct: 401 ILDEPIELSGYRLTAGTVVLLHTWIAGLNEENFKDAKK 438


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 277 SHFNPEHKDHGHPNDVNRHV 336
           S F+ + KD G PND N ++
Sbjct: 345 SSFDFQSKDQGPPNDGNGNI 364


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 265 HNRRSGRLSHARESHIHPEAAQ 200
           HN RS   SHA+ S I  E  +
Sbjct: 260 HNERSTPRSHAKPSLIDDEPTE 281


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 265 HNRRSGRLSHARESHIHPEAAQ 200
           HN RS   SHA+ S I  E  +
Sbjct: 260 HNERSTPRSHAKPSLIDDEPTE 281


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 265 HNRRSGRLSHARESHIHPEAAQ 200
           HN RS   SHA+ S I  E  +
Sbjct: 260 HNERSTPRSHAKPSLIDDEPTE 281


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 205 LPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHP 315
           L P  +      K DLS   ++ G+ F      HG P
Sbjct: 404 LTPKRFHSRAASKEDLSPSSLADGARFGGSCLIHGPP 440


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 205 LPPGEYGFHVHEKGDLSGGCVSTGSHFNPEHKDHGHP 315
           L P  +      K DLS   ++ G+ F      HG P
Sbjct: 404 LTPKRFHSRAASKEDLSPSSLADGARFGGSCLIHGPP 440


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 178 VHVQGGITGL 207
           +HV GG+TGL
Sbjct: 205 IHVVGGLTGL 214


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,339
Number of Sequences: 438
Number of extensions: 3767
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)