Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M17
(409 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele... 136 2e-31
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom... 122 2e-27
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar... 120 9e-27
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ... 114 6e-25
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung... 112 2e-24
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary... 108 5e-23
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt... 72 5e-21
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote... 100 2e-20
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma... 87 1e-16
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M... 80 2e-14
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ... 75 4e-13
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe... 71 1e-11
UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4; Archae... 65 6e-10
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa... 63 2e-09
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya... 63 2e-09
UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila ... 61 1e-08
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre... 60 2e-08
UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12; Archa... 58 7e-08
UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga... 58 9e-08
UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.019
UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3; Thermop... 35 0.73
UniRef50_UPI00006CFBEB Cluster: Protein kinase domain containing... 32 3.9
UniRef50_Q38B22 Cluster: Putative uncharacterized protein; n=1; ... 32 3.9
UniRef50_Q91F97 Cluster: 428L; n=1; Invertebrate iridescent viru... 31 6.8
UniRef50_Q3TYB3 Cluster: Visual cortex cDNA, RIKEN full-length e... 31 6.8
UniRef50_Q55IZ8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.8
UniRef50_Q5NNC1 Cluster: Amidophosphoribosyltransferase; n=2; Zy... 31 8.9
UniRef50_Q3VZK4 Cluster: UvrD/REP helicase:HRDC domain; n=1; Fra... 31 8.9
UniRef50_Q1D8K2 Cluster: Methionyl-tRNA synthetase; n=2; Cystoba... 31 8.9
UniRef50_Q9TZK7 Cluster: Putative uncharacterized protein; n=3; ... 31 8.9
>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
sapiens (Human)
Length = 97
Score = 136 bits (328), Expect = 2e-31
Identities = 61/94 (64%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 208
MTKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 209 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 307
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L37 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 158
Score = 122 bits (295), Expect = 2e-27
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +2
Query: 35 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 214
KGTSSFGKR NK+HTLCRRCGR S+HIQKS CA CGYP+AK+R Y+WS KA
Sbjct: 69 KGTSSFGKRHNKSHTLCRRCGRRSFHIQKSTCANCGYPSAKVRKYNWSEKAKRRKTTGTG 128
Query: 215 XMRHLKIVRRRFRNGFKEGKP 277
M HLK V RRF+NGF+ G P
Sbjct: 129 RMSHLKDVHRRFKNGFQVGTP 149
>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 95
Score = 120 bits (290), Expect = 9e-27
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 208
M KGT SFGKRRNK+HTLC RCGR S+HIQKS+C+ C YPAA+ R+Y+WSVKA
Sbjct: 1 MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60
Query: 209 XXXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 307
MR+L+ V RRF+ F+EG + TP KA ASS
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94
>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L37 - Canis familiaris
Length = 124
Score = 114 bits (275), Expect = 6e-25
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = +2
Query: 35 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 214
KGTSSFGKRRNK HTLCRRCG +YH+QKS C +C YPA R Y+W KA
Sbjct: 30 KGTSSFGKRRNKMHTLCRRCGSKAYHLQKSTCGKCRYPAKWKRKYNWGAKAKRRNTTGTG 89
Query: 215 XMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 307
MRHLKIV R R+GF+ G P P + AVA+S
Sbjct: 90 RMRHLKIVYHRCRHGFRGGTTPKPKRAAVAAS 121
>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 88
Score = 112 bits (270), Expect = 2e-24
Identities = 47/81 (58%), Positives = 58/81 (71%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 208
M KGT SFGKR NK+HTLC RCGR S+H+QK C+ CGYP+AK RS++W+ KA
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTG 60
Query: 209 XXXMRHLKIVRRRFRNGFKEG 271
MR+LK V RRF+NGF+ G
Sbjct: 61 TGRMRYLKHVSRRFKNGFQTG 81
>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
Eukaryota|Rep: 60S ribosomal protein L37 -
Caenorhabditis elegans
Length = 91
Score = 108 bits (259), Expect = 5e-23
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 208
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 209 XXXMRHLKIVRRRFRNGFKEGKPTP 283
RHL+ V RFRNGF+ P P
Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPKP 85
>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
cytosolic; n=1; Neurospora crassa|Rep: Probable
ribosomal protein L37.e.A, cytosolic - Neurospora crassa
Length = 124
Score = 72.1 bits (169), Expect(2) = 5e-21
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +2
Query: 86 RRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFK 265
R R S H QK CA CGYPAAK R Y+WS KA +R+L V R+F+NGF+
Sbjct: 52 RFTSRRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQ 111
Query: 266 EGKPTPPKKAVAS 304
G P K VA+
Sbjct: 112 TGVPKGSKGPVAA 124
Score = 50.4 bits (115), Expect(2) = 5e-21
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGR 100
MTKGTSSFGKR KTH LCRRCGR
Sbjct: 1 MTKGTSSFGKRHTKTHGLCRRCGR 24
>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
n=5; Eukaryota|Rep: Ribosomal protein L37e containing
protein - Tetrahymena thermophila SB210
Length = 214
Score = 99.5 bits (237), Expect = 2e-20
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +2
Query: 32 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYH-WSVKAXXXXXXX 208
T+GT +FGKR KTHTLCRRCG+++YH QK +CA CGYP AK+R Y W K
Sbjct: 48 TRGTPAFGKRHQKTHTLCRRCGKATYHKQKLRCAACGYPDAKMRRYDGWGQKVRDRKGQG 107
Query: 209 XXXMRHLKIVRRRFRNGFKEG 271
MR++K + RR +NGF+ G
Sbjct: 108 TGRMRYMKTIARRAKNGFRSG 128
>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
maydis|Rep: Ribosomal protein L37 - Ustilago maydis
(Smut fungus)
Length = 125
Score = 87.0 bits (206), Expect = 1e-16
Identities = 37/68 (54%), Positives = 44/68 (64%)
Frame = +2
Query: 68 KTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRR 247
KTHT+CRRC ++H QK CA CGYPAAK+RSY W KA MR+LK V RR
Sbjct: 50 KTHTVCRRCNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRR 109
Query: 248 FRNGFKEG 271
+NGF+ G
Sbjct: 110 AKNGFQTG 117
>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
Encephalitozoon cuniculi
Length = 90
Score = 79.8 bits (188), Expect = 2e-14
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 208
M+KGT+SFGK+ + +CRRCGR SYH QK+ C+ CGYP K+R+ S+KA
Sbjct: 1 MSKGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRN-PGSIKARRRRTIG 59
Query: 209 XXXMRHLKIVRRRFRNGFKEGKP 277
MR++K R +NG K G P
Sbjct: 60 TGRMRYMKRELRAAKNGHK-GDP 81
>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 103
Score = 75.4 bits (177), Expect = 4e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQ 136
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
grisea 70-15
Length = 188
Score = 70.5 bits (165), Expect = 1e-11
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +2
Query: 89 RCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKE 268
+ R S H+QK CA CGYPAAK R Y+WS KA MR+L V R+F+N F+
Sbjct: 115 KMSRRSLHVQKHTCASCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQT 174
Query: 269 GKP 277
G P
Sbjct: 175 GTP 177
>UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4;
Archaea|Rep: 50S ribosomal protein L37e - Thermoplasma
volcanium
Length = 54
Score = 64.9 bits (151), Expect = 6e-10
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 MTKGTSSFGKRRNK-THTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWS 178
M+ GT+ GK NK TH CRRCG +Y+++ +C+ CG+PA ++RSY W+
Sbjct: 1 MSNGTAVMGKINNKKTHITCRRCGHHTYNVRTKRCSHCGFPAPRIRSYKWA 51
>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
furiosus
Length = 62
Score = 62.9 bits (146), Expect = 2e-09
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 29 MTKGTSSFGKRRNK-THTLCRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 184
M GT++FGKR + TH CRRCGR SY+++K CA CG+ + +LR Y WS K
Sbjct: 1 MGSGTATFGKRNSTPTHIRCRRCGRVSYNVKKGYCAACGFGRSRRLRKYRWSKK 54
>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L37e -
Halobacterium salinarium (Halobacterium halobium)
Length = 58
Score = 62.9 bits (146), Expect = 2e-09
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 38 GTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA-AKLRSYHWSVK 184
GT S GK+ THT CRRCG SYH +K C+ CG+ A AK R Y W K
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54
>UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 78
Score = 60.9 bits (141), Expect = 1e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 29 MTKGTSSFGKRRNKTHTLCRRCGRSSYH 112
MTKGT+SFGKR NKTHT+CRRCG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L37e - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 55
Score = 60.1 bits (139), Expect = 2e-08
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 53 GKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAK-LRSYHWSVK 184
GK+ KTH CRRCGR++YHI K CA CG+ +K +R Y W K
Sbjct: 2 GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNK 46
>UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12;
Archaea|Rep: 50S ribosomal protein L37e - Methanococcus
maripaludis
Length = 64
Score = 58.0 bits (134), Expect = 7e-08
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 29 MTKGTSSFGKR-RNKTHTLCRRCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 184
MTKGT S GK + H +CRRCGR ++H++K CA CG+ ++K++ + W K
Sbjct: 1 MTKGTPSQGKHNKGSNHIVCRRCGRRAFHVRKKVCAACGFGRSSKIKRFAWQWK 54
>UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L37e -
Caldivirga maquilingensis IC-167
Length = 61
Score = 57.6 bits (133), Expect = 9e-08
Identities = 26/40 (65%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 29 MTKGTSSFGKR-RNKTHTLCRRCGRSSYHIQKSKCAQCGY 145
MTKGT SFG+ R KTH C RCGR SY+I K CA CGY
Sbjct: 1 MTKGTPSFGRMSRGKTHIRCPRCGRHSYNIVKGYCAACGY 40
>UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 89
Score = 39.9 bits (89), Expect = 0.019
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 140 GYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 301
G+ + S +WSVKA MR+++ V +RF++ F+EG P+K A
Sbjct: 33 GFNFCDVISDNWSVKAIRRKTTGTGRMRYMRHVPKRFKSNFREGTEATPRKRAA 86
>UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3;
Thermoprotei|Rep: Methionyl-tRNA synthetase -
Cenarchaeum symbiosum
Length = 548
Score = 34.7 bits (76), Expect = 0.73
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +2
Query: 23 DKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHW 175
D+ +GT K + LC CGR I CA CG K S H+
Sbjct: 137 DRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVKRSSRHY 187
>UniRef50_UPI00006CFBEB Cluster: Protein kinase domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
kinase domain containing protein - Tetrahymena
thermophila SB210
Length = 949
Score = 32.3 bits (70), Expect = 3.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 42 PQASVSAEIRPIRYAEDVVDRHITFKNQNAPNVDILQQNY 161
PQ VS ++RPI + ++ +NQ N+D+ QNY
Sbjct: 383 PQTPVSNQVRPINGKIPIQNQQYQAQNQRPSNIDVGPQNY 422
>UniRef50_Q38B22 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1003
Score = 32.3 bits (70), Expect = 3.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 68 KTHTLCRRCGRSSYHIQKSKCAQCG 142
+THT CR C R ++ +K +C CG
Sbjct: 784 RTHTSCRACFRLTFLDEKERCEHCG 808
>UniRef50_Q91F97 Cluster: 428L; n=1; Invertebrate iridescent virus
6|Rep: 428L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 1193
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 44 SSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRS 166
SS K ++K H LC+ Y+ ++ CG+ KLR+
Sbjct: 1015 SSLEKPQDKIHALCKELEECGYNYNGTETMMCGWNGKKLRA 1055
>UniRef50_Q3TYB3 Cluster: Visual cortex cDNA, RIKEN full-length
enriched library, clone:K230320F07 product:inversin,
full insert sequence; n=5; Euteleostomi|Rep: Visual
cortex cDNA, RIKEN full-length enriched library,
clone:K230320F07 product:inversin, full insert sequence
- Mus musculus (Mouse)
Length = 736
Score = 31.5 bits (68), Expect = 6.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 35 KGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAK 157
+GTSS KRR +T+ RRC ++ C G PA K
Sbjct: 394 QGTSSVEKRRGETNGKHRRCEEGPSSTRQPLCTGSGRPAEK 434
>UniRef50_Q55IZ8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 364
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 74 HTLCRRCGRSSYHIQKSKCAQCGYPAAK 157
H+ C C RSS +QK KC C PA++
Sbjct: 50 HSFCSHCIRSSLDVQK-KCPSCNEPASE 76
>UniRef50_Q5NNC1 Cluster: Amidophosphoribosyltransferase; n=2;
Zymomonas mobilis|Rep: Amidophosphoribosyltransferase -
Zymomonas mobilis
Length = 281
Score = 31.1 bits (67), Expect = 8.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 74 HTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSY 169
H+ C C +S + + + C QCG+P + + Y
Sbjct: 41 HSFCVECWQSLHFLVEPACIQCGFPLPRDQQY 72
>UniRef50_Q3VZK4 Cluster: UvrD/REP helicase:HRDC domain; n=1;
Frankia sp. EAN1pec|Rep: UvrD/REP helicase:HRDC domain -
Frankia sp. EAN1pec
Length = 759
Score = 31.1 bits (67), Expect = 8.9
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 20 SDKMTKGTSSFGKRRNKTHTLCRRCGR--SSYHIQKSKCAQC 139
S + GT+ G+ RN++ LCR CGR + + +C C
Sbjct: 633 SARAEPGTAGNGRARNRSSVLCRVCGRALAGAEARVGRCEAC 674
>UniRef50_Q1D8K2 Cluster: Methionyl-tRNA synthetase; n=2;
Cystobacterineae|Rep: Methionyl-tRNA synthetase -
Myxococcus xanthus (strain DK 1622)
Length = 703
Score = 31.1 bits (67), Expect = 8.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 23 DKMTKGTSSFGKRRNKTHTLCRRCGRS--SYHIQKSKCAQCGYPAAKLRSYH 172
D+ KGT K ++ C +CG++ + ++CA CG P + S H
Sbjct: 136 DRFIKGTCPNCKASDQYGDACEKCGKAYDPTDLIDARCALCGTPPVRKHSEH 187
>UniRef50_Q9TZK7 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 671
Score = 31.1 bits (67), Expect = 8.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 47 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 154
++ K TH C +CG+ + + KC CG P A
Sbjct: 93 TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,034,869
Number of Sequences: 1657284
Number of extensions: 5935308
Number of successful extensions: 14444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14439
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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