Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M16
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 186 2e-47
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 148 4e-36
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 145 3e-35
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 144 8e-35
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 126 2e-29
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 115 4e-26
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 107 6e-24
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 103 2e-22
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 74 1e-13
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 64 8e-11
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 42 4e-04
09_04_0030 + 13940168-13940250,13940703-13941714 40 0.001
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 33 0.22
09_04_0029 - 13932414-13933416,13933821-13933903 30 1.5
06_03_0431 + 20713186-20713977 29 3.5
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 29 4.7
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 6.2
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 186 bits (452), Expect = 2e-47
Identities = 93/187 (49%), Positives = 109/187 (58%), Gaps = 1/187 (0%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
+CHTD YT SGK PEG+FP +PGDHV+P Y +C CKFC
Sbjct: 48 LCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 107
Query: 320 LNPKTNLCQKVRSTQGQGVMP-DGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAE 496
+ KTNLC KVR+ G GVM D RF G+ +YHFMG STFSQYTVV ++S+ K+
Sbjct: 108 KSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINP 167
Query: 497 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGV 676
APLDKVCLLGCGV TG GA NTAKVE GS AIF +RIIG+
Sbjct: 168 QAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGI 227
Query: 677 DINPDXF 697
DI+ F
Sbjct: 228 DIDSKKF 234
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +1
Query: 7 STVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
ST G V+ C AAVAW A +P++I + V PP+AG VRVK+ T
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFT 46
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 148 bits (359), Expect = 4e-36
Identities = 75/188 (39%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
+CHTD Y K VFP PGDHV+P++ +C C+ C
Sbjct: 46 LCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTELSPGDHVLPVFTGECGDCRHC 105
Query: 320 LNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKG-QELYHFMGCSTFSQYTVVLEISLCKVA 493
L+ ++NLC +R +G M DG RF +G Q +YHF+G STFS+YTVV + K+
Sbjct: 106 LSEESNLCDLLRINTDRGAMIGDGQTRFTARGGQPVYHFLGTSTFSEYTVVHVGCVAKIH 165
Query: 494 EAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIG 673
AAPLDKVC+L CG+ TG+GA +N AK G AIF +RIIG
Sbjct: 166 PAAPLDKVCVLSCGISTGFGATVNVAKPPKGCTVAIFGLGAVGLAAMEGARISGASRIIG 225
Query: 674 VDINPDXF 697
VD+NP F
Sbjct: 226 VDLNPAKF 233
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +1
Query: 4 MSTVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
M+T G V++C AAVAW AGKPLSI + V PP+A VR+K+ T
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYT 44
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 145 bits (352), Expect = 3e-35
Identities = 72/187 (38%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
+CHTD Y K VFP PGDHV+P++ +C C C
Sbjct: 46 LCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHC 105
Query: 320 LNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAE 496
+ ++N+C +R +GVM DG RF KG+ ++HF+G STFS+YTV+ L K+
Sbjct: 106 KSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINP 165
Query: 497 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGV 676
APLDKVC+L CG TG+GA +N AK + G AIF +RIIGV
Sbjct: 166 EAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGV 225
Query: 677 DINPDXF 697
D+NP F
Sbjct: 226 DLNPAKF 232
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +1
Query: 4 MSTVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
M+T G V++C AAVAW AGKPLSI + V PP+A VRVK+ T
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYT 44
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 144 bits (348), Expect = 8e-35
Identities = 71/187 (37%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
+CHTD Y K VFP PGDHV+P++ +C C C
Sbjct: 46 LCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHC 105
Query: 320 LNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAE 496
+ ++N+C +R +GVM DG RF G+ +YHF+G STFS+YTV+ + K+
Sbjct: 106 KSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINP 165
Query: 497 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGV 676
AAPLDKVC+L CG+ TG GA +N AK GS AIF +RIIG+
Sbjct: 166 AAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGI 225
Query: 677 DINPDXF 697
D+N + F
Sbjct: 226 DLNANRF 232
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1
Query: 4 MSTVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
M+T G V++C AAVAW A KPL I + V PP+A VRVK+ T
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFT 44
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 126 bits (303), Expect = 2e-29
Identities = 72/194 (37%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Frame = +2
Query: 140 VCHTDAYTLSGKSP-EGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKF 316
+CHTD G++ + FP PGDHVVP++ +C C +
Sbjct: 63 ICHTDLSAWKGENELQRKFPRILGHEAAGVVESVGEGVEDLAPGDHVVPIFTGECGACTY 122
Query: 317 CLNPKTNLCQKVRSTQGQGVM-PDGTRRF----RCKGQE--LYHFMGCSTFSQYTVVLEI 475
C + K+NLC+ R + M DG RF R G +YHF+ STF++YTV+
Sbjct: 123 CESSKSNLCKTYRVNPFKSTMVTDGGTRFTMIDRSSGARNPVYHFLNTSTFAEYTVIDSA 182
Query: 476 SLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXX 655
K+ APL+K+ LL CGV TG GAA NTA V GS AIF
Sbjct: 183 CAVKINPKAPLEKMSLLSCGVSTGVGAAWNTANVSKGSTVAIFGLGAIGLAVAEGARLRG 242
Query: 656 XNRIIGVDINPDXF 697
+RIIGVDINP+ F
Sbjct: 243 ASRIIGVDINPEKF 256
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 10 TVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
T G ++C AAVA G+ L + + V PP VR+K+ T
Sbjct: 20 TKGKPIKCKAAVAHGPGEALVMEEVEVAPPARMEVRLKVLFT 61
>02_05_0070 - 25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 115 bits (276), Expect = 4e-26
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
+C +D + +FP + GDHV+ +++ +C +CK C
Sbjct: 662 ICRSDVTQWQSTAQTDLFPRIFGHEASGVVESVGEGVTEFEVGDHVLTVFIGECMSCKHC 721
Query: 320 LNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAE 496
++ K+N+CQK+ + +GVM D RF +G+ +YH+ S+FS+YTVV KV
Sbjct: 722 VSGKSNMCQKL-GLERRGVMHSDQKTRFSLRGKPVYHYCAVSSFSEYTVVHSGCAVKVGP 780
Query: 497 AAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGV 676
P+D++CLL CGV G GAA A + GS+ IF + IIGV
Sbjct: 781 TVPMDRICLLSCGVSAGLGAAWKVADISKGSSVVIFGLGTVGLSVAQGAKLRGASIIIGV 840
Query: 677 DINPD 691
D NP+
Sbjct: 841 DTNPE 845
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 7 STVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
S+ + C AAVAWA G+ L + + V PP+A +RVK+ +T
Sbjct: 618 SSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVST 660
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 107 bits (258), Expect = 6e-24
Identities = 58/144 (40%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +2
Query: 275 VVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP-DGTRRFRC--KGQELYHFMGCST 445
VVP++ QC+ C CL+ ++NLC K+ + G +MP D T RF G+ + HF+ S+
Sbjct: 2 VVPVFAAQCSECPDCLSDRSNLCSKLPNVAG--LMPRDRTTRFSSVSTGEPIRHFLSVSS 59
Query: 446 FSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXX 625
F++YTVV + K+ P CLL CG+ TG GAA A VEPGS+ A+F
Sbjct: 60 FAEYTVVDITHIVKLDVGFPPAMACLLSCGISTGVGAAWKVAAVEPGSSVAVFGLGAVGL 119
Query: 626 XXXXXXXXXXXNRIIGVDINPDXF 697
RIIGVD+NPD F
Sbjct: 120 AVAQGARMRGAKRIIGVDLNPDKF 143
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 103 bits (246), Expect = 2e-22
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +2
Query: 266 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCK-GQELYHFMGCS 442
GD VVP ++ QC C C + ++N+C R G+ DGT RFR + G ++HF+G S
Sbjct: 31 GDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFRDRHGAPIHHFLGVS 90
Query: 443 TFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 604
+FS+YTVV + +V A P LL CG TG GAA AKVEPGS+ AIF
Sbjct: 91 SFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGAAWKLAKVEPGSSVAIF 144
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 74.1 bits (174), Expect = 1e-13
Identities = 50/137 (36%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
+CHTD TL K + FP GD VVP ++ QC++C C
Sbjct: 47 LCHTDV-TLWHKV-DPAFPRILGHEAYGVVESVGENVEGLAAGDTVVPTFMGQCDSCASC 104
Query: 320 LNPKTNLCQKVRSTQGQGVMPDGTRRF-RCKGQELYHFMGCSTFSQYTVVLEISLCKVAE 496
TN C V T G G+ DGT RF +G+ L + ++FSQYTVV + KV
Sbjct: 105 AAEWTNQCTAVPFTMGPGMRRDGTTRFWDGEGKPLSDTVAVTSFSQYTVVDVNQVVKVDP 164
Query: 497 AAPLDKVCLLGCGVPTG 547
A P CLLGC TG
Sbjct: 165 AVPPKIACLLGCCGGTG 181
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 25 LQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
++C AAV AA +PL + + V PPKA +R+K+ T
Sbjct: 9 IRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICT 45
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 64.5 bits (150), Expect = 8e-11
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 7/203 (3%)
Frame = +2
Query: 95 RQKPVQCALSSRPPVVCHTDAYTLSGK----SPEGVFPXXXXXXXXXXXXXXXXXXXXXK 262
R K + + ++ VCH+D + L G+ SP V
Sbjct: 71 RPKAGELLIKTKACGVCHSDLHVLKGELPFSSPCVVGHEITGEVVDHGTHTPAEIINRFP 130
Query: 263 PGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDG-TRRF-RCKGQELYHFM 433
G HVV ++ C C +C+ + +LC+ + + +G + DG TR F R G+ +Y +
Sbjct: 131 VGSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYDGQTRLFLRSNGKPVYMY- 189
Query: 434 GCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXX 613
++Y VV +L + + P + +LGC V T YGA + A++ G + A+
Sbjct: 190 SMGGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALRHAAEMRAGDSVAVIGVG 249
Query: 614 XXXXXXXXXXXXXXXNRIIGVDI 682
+ +I VD+
Sbjct: 250 GVGSSCLQIAKAFGASEVIAVDV 272
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 40 AVAWAAGKPLSIXALXVXPPKAGAVRVKLTATG 138
AV W G+PL++ + PKAG + +K A G
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACG 85
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 25 LQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
++C AAV AAG+PL++ + V PPKA VR+K+ T
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCT 45
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 4/158 (2%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHV-VPLYVPQCNTCKF 316
+CHTD + + ++P K GD V V +V C C+
Sbjct: 44 ICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCEC 103
Query: 317 CLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCST---FSQYTVVLEISLCK 487
C N N C K+ +T C G + H G +T FS VV E + +
Sbjct: 104 CGNGYENYCAKMVTT--------------CNGVDHDHGGGAATQGGFSDAIVVNEHYVLR 149
Query: 488 VAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAI 601
V PLD L C T Y + PG + +
Sbjct: 150 VPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGV 187
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHV-VPLYVPQCNTCKF 316
+CH+D +T+ + V+P K GD V V V C C+
Sbjct: 59 ICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCES 118
Query: 317 CLNPKTNLCQKVRSTQGQGVMPDGTRRF 400
C + N C V DGTR +
Sbjct: 119 CRDGCENYCSGGVVFTYNSVDRDGTRTY 146
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/69 (24%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHV-VPLYVPQCNTCKF 316
+CHTD + + ++P K GD V V +V C TC
Sbjct: 44 ICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDS 103
Query: 317 CLNPKTNLC 343
C N C
Sbjct: 104 CGKGYENYC 112
>06_03_0431 + 20713186-20713977
Length = 263
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 5 CQQSVX--CFSAWPQSRGQQASRCPSXLLXW 91
C+ SV CF+ W +SRG++A+ C W
Sbjct: 191 CRNSVHGECFARWKRSRGRRAATCVVCRARW 221
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 122 SSRPPVVCHTDAYTLSGKSPE 184
+S+PPVV T YTL+G PE
Sbjct: 20 TSQPPVVFKTQLYTLTGVPPE 40
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 360 VERTFWHKLVFGFKQNLHVLHCGTYRGT 277
V + WH+LV G L ++ G+ RGT
Sbjct: 1112 VPSSIWHRLVAGLNAQLRLVRRGSLRGT 1139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,329,830
Number of Sequences: 37544
Number of extensions: 328044
Number of successful extensions: 760
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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