Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M16
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 227 8e-60
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 220 7e-58
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 220 7e-58
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 220 7e-58
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 227 bits (554), Expect = 8e-60
Identities = 109/223 (48%), Positives = 130/223 (58%), Gaps = 1/223 (0%)
Frame = +2
Query: 32 AWPQSRGQQASRCPSXLLXWXRQKPVQCALSS-RPPVVCHTDAYTLSGKSPEGVFPXXXX 208
A P S G Q W +KP + AL VCHTDAYTL G PEG+FP
Sbjct: 183 ARPPSPGAQKLHSRLKRSKWLHRKPTKFALKYILYTSVCHTDAYTLDGHDPEGLFPVVLG 242
Query: 209 XXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG 388
PGDHVVPLYVPQC C++C NPKTN+CQK+R +QG G MPDG
Sbjct: 243 HEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNMCQKIRVSQGDGFMPDG 302
Query: 389 TRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNT 568
T RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT
Sbjct: 303 TSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLLGCGISTGYGAVLNT 362
Query: 569 AKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDINPDXF 697
KVE GS A++ +I+G+D+ F
Sbjct: 363 CKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKF 405
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 220 bits (538), Expect = 7e-58
Identities = 99/186 (53%), Positives = 118/186 (63%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
VCHTDAYTL G PEG+FP PGDHVVPLYVPQC C++C
Sbjct: 47 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYC 106
Query: 320 LNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEA 499
NPKTNLCQK+R +QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV
Sbjct: 107 KNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPE 166
Query: 500 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVD 679
APL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D
Sbjct: 167 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGID 226
Query: 680 INPDXF 697
+ F
Sbjct: 227 LIESKF 232
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1
Query: 7 STVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
ST G V+ C AAVAW+A PLSI + V PPKA VRVK+ T
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYT 45
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 220 bits (538), Expect = 7e-58
Identities = 99/186 (53%), Positives = 118/186 (63%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
VCHTDAYTL G PEG+FP PGDHVVPLYVPQC C++C
Sbjct: 47 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYC 106
Query: 320 LNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEA 499
NPKTNLCQK+R +QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV
Sbjct: 107 KNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPE 166
Query: 500 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVD 679
APL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D
Sbjct: 167 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGID 226
Query: 680 INPDXF 697
+ F
Sbjct: 227 LIESKF 232
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1
Query: 7 STVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVKLTAT 135
ST G V+ C AAVAW+A PLSI + V PPKA VRVK+ T
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYT 45
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 220 bits (538), Expect = 7e-58
Identities = 99/186 (53%), Positives = 118/186 (63%)
Frame = +2
Query: 140 VCHTDAYTLSGKSPEGVFPXXXXXXXXXXXXXXXXXXXXXKPGDHVVPLYVPQCNTCKFC 319
VCHTDAYTL G PEG+FP PGDHVVPLYVPQC C++C
Sbjct: 49 VCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYC 108
Query: 320 LNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEA 499
NPKTNLCQK+R +QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV
Sbjct: 109 KNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPE 168
Query: 500 APLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVD 679
APL+KV LLGCG+ TGYGA LNT KVE GS A++ +I+G+D
Sbjct: 169 APLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGID 228
Query: 680 INPDXF 697
+ F
Sbjct: 229 LIESKF 234
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +1
Query: 7 STVGXVLQCLAAVAWAAGKPLSIXALXVXPPKAGAVRVK 123
ST G V+ C AAVAW+A PLSI + V PPKA VRVK
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVK 41
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 424 VEFLSFTAESPSAIWHHTLTL 362
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 443 TFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 586
TF +Y + +I KV+ L + CG T Y +L V+PG
Sbjct: 128 TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPG 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,321,220
Number of Sequences: 27780
Number of extensions: 276138
Number of successful extensions: 579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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