Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M15
         (798 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g16410.1 68417.m02483 expressed protein contains Pfam PF05421...    32   0.51 
At4g28490.1 68417.m04076 leucine-rich repeat transmembrane prote...    30   2.0  
At3g15990.1 68416.m02023 sulfate transporter, putative similar t...    29   4.7  
At5g37790.1 68418.m04551 protein kinase family protein contains ...    28   6.2  
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina...    28   6.2  

>At4g16410.1 68417.m02483 expressed protein contains Pfam PF05421:
           Protein of unknown function (DUF751)
          Length = 185

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +1

Query: 475 WGLEAIAVDY-VRASIFGPILPKIAIGLVYLISIATLGGLFYIISHDVGIANGIRQF 642
           +GL A+ V     +++F PI   +   +  ++ +  LGG FYI+S  V    G+ +F
Sbjct: 123 YGLYALTVSTGALSAVFEPIFELLKNPISAILILLILGGSFYIVSQVVSAMIGVNEF 179


>At4g28490.1 68417.m04076 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 999

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 466 HSFWGLEAIAVDYVRASIFGPILPKIAIGLVYLISIATLGGLFY-IISHDVGIANGIRQF 642
           H FWGL  +++  +  + F   +PK  IG   L ++      F   I +++G  NGI + 
Sbjct: 421 HGFWGLPRLSLLELSDNSFTGSIPKTIIGAKNLSNLRISKNRFSGSIPNEIGSLNGIIEI 480

Query: 643 WAIKSD 660
              ++D
Sbjct: 481 SGAEND 486


>At3g15990.1 68416.m02023 sulfate transporter, putative similar to
           sulfate transporter [Arabidopsis thaliana] GI:2285885;
           contains Pfam profiles PF00916: Sulfate transporter
           family, PF01740: STAS domain
          Length = 653

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
 Frame = +1

Query: 298 SFRTSCVRRSAEKVEDHSRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILI------ 459
           SF  S V  +A      S + V+   V   L+ L+PL    PN +  +++   +      
Sbjct: 392 SFSRSAVNYNAGAKTAVSNI-VMASAVLVTLLFLMPLFYYTPNVILAAIILTAVIGLIDY 450

Query: 460 -TAHSFWGLEAIAVDYVRASIFGPILPKIAIGLVYLISIATLGGLFYII---SHDVGIAN 627
             A+  W ++         S FG +   + +GL   ++++ +  L ++    + + G   
Sbjct: 451 QAAYKLWKVDKFDFFTCLCSFFGVLFVSVPLGLAIAVAVSVIKILLHVTRPNTSEFGNIP 510

Query: 628 GIRQFWAIKSDAQKS*VPFFL 690
           G + + ++    + S +P FL
Sbjct: 511 GTQIYQSLGRYREASRIPGFL 531


>At5g37790.1 68418.m04551 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 552

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = -2

Query: 419 IMRANGINGTSAAETTLSMTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLTG 240
           ++  N  NG    ETT + T  L W+   S ++    V N  + F+ G ++ +   F  G
Sbjct: 157 VLMVNLENGVK--ETTGNATDDLRWTRARSLEKSISPVANTLVRFSYGEIVAATRNFSKG 214

Query: 239 NEL 231
             L
Sbjct: 215 RVL 217


>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to SP|Q9Z1T6 FYVE
           finger-containing phosphoinositide kinase (EC 2.7.1.68)
           (1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
           (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF01363: FYVE zinc finger, PF00118:
           TCP-1/cpn60 chaperonin family
          Length = 1791

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 501 LRAR*YIWSYFTQNCHRPGVSHLHCHTGR 587
           LR   +  SY  ++C  P  +H+HC+T R
Sbjct: 897 LRDHLFDQSYRCRSCEMPSEAHVHCYTHR 925


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,855,165
Number of Sequences: 28952
Number of extensions: 337342
Number of successful extensions: 667
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)