Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M13
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 110 YVFITLVNCEAFFC 69
           Y F+  V C AFFC
Sbjct: 56  YAFVAPVKCLAFFC 69


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 110 YVFITLVNCEAFFC 69
           Y F+  V C AFFC
Sbjct: 289 YAFVAPVKCLAFFC 302


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 110 YVFITLVNCEAFFC 69
           Y F+  V C AFFC
Sbjct: 289 YAFVAPVKCLAFFC 302


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 261 LHWVQLRKEMGASHHVETTREKFHRKFTENPFVPLGCLATA 383
           + W+Q  + +  S + E  REK   +   + +VP  C  T+
Sbjct: 462 IQWIQNPRTITESKNFEPWREKCVVEGNPHCWVPHSCKLTS 502


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = +2

Query: 341  YRESVCSSRLFSNSWSFIHGSLEF*NWKDKTLSANDESENSCTRAYHC 484
            + E+   +++ + S + +HG  ++ N+  + L+     +   T   HC
Sbjct: 1147 FDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDGVRTTPIHC 1194


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 199 IH*IVTACVTI*FCTEIILLC 137
           +H +   C+   +C  IILLC
Sbjct: 277 MHLLFLLCIYYFYCALIILLC 297


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 174 LQSSFVLKLYCYVKI 130
           + SSFV K +CYV +
Sbjct: 30  INSSFVHKEHCYVLV 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,362
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)