Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M13
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   3.5  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    23   6.2  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    23   6.2  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 321 LLSFLHDEKLPFPCAVAPNVNPL-VLVQLTFSSF*KLTVSNLYIK 190
           L+  +H  ++P PC     +NP+ VL  +  ++       N+ +K
Sbjct: 392 LVHLMHPTRVPKPCCAPTKLNPISVLYHIDDANINLKKYKNMVVK 436


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 437 SANDESENSCTRAYHCC 487
           SA++  ++ C R Y CC
Sbjct: 20  SASEVQDDKCKRKYKCC 36


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 437 SANDESENSCTRAYHCC 487
           SA++  ++ C R Y CC
Sbjct: 48  SASEVQDDKCKRKYKCC 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,953
Number of Sequences: 2352
Number of extensions: 10281
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)