Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M09
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-6|AAK68450.1|   81|Caenorhabditis elegans Hypothetical ...    62   3e-10
Z83105-1|CAB05480.1|  335|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>AC025715-6|AAK68450.1|   81|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.9 protein.
          Length = 81

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +2

Query: 314 SGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 448
           +GG+WRFYT+DS            MSL+FIASVF+LHIWGK+TR+
Sbjct: 35  NGGLWRFYTEDSTGLKIGPVPVLVMSLVFIASVFVLHIWGKFTRS 79


>Z83105-1|CAB05480.1|  335|Caenorhabditis elegans Hypothetical
           protein F14H3.1 protein.
          Length = 335

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = -2

Query: 338 YRTSTFLQNQHQCFGFWLQL***LIFVD-GLYY----HWLFVGQQKLLWVIYSQILXEVA 174
           YR S F Q  HQ  GFW  L   +  +  G+ +      L  G QK+   IY Q + +  
Sbjct: 112 YRYSVFTQISHQKLGFWALLGLFIFLISHGIVWSSVCELLLYGDQKVADYIYKQFMKDYH 171

Query: 173 LGD*GIF 153
           +   G+F
Sbjct: 172 VDSHGLF 178


>Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical
           protein F25D7.5 protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -1

Query: 153 YSNVVKLYFKSDIHLARLASTI*VNKQLRKCYSVGRLTCNASNSTDTLS 7
           Y N+ K Y ++ +++  L S +  +K+     S   LTC+ + S  T+S
Sbjct: 21  YCNISKCYVETALNILELNSILSSSKETIDTTSTASLTCSYTKSITTVS 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,020,545
Number of Sequences: 27780
Number of extensions: 219375
Number of successful extensions: 360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)