Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M08
         (364 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    24   1.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   3.5  

>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 83  KKINVETHNPSTDL*FVHYFFCVLNEISTI 172
           K+     HNP T+L  V Y  C+  E+  +
Sbjct: 51  KEREAANHNPGTELFEVCYQQCIYEELEAV 80


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 161 ISTIVHRYLPSSVTRMYRHKTQIKWYMQ 244
           I ++   YLP+ +      KT+++W M+
Sbjct: 333 IRSVFLHYLPAMLLMKRPRKTRLRWMME 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,290
Number of Sequences: 2352
Number of extensions: 3714
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)