Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M07
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 33 0.29
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.39
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 32 0.51
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 31 1.2
SB_44950| Best HMM Match : rve (HMM E-Value=3.8e-12) 30 2.1
SB_32076| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 30 2.1
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 29 2.7
SB_57682| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39) 29 4.8
SB_58744| Best HMM Match : ResIII (HMM E-Value=0.14) 28 6.3
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 28 6.3
SB_21867| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_22008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 524 PSSLLGNNWFDNLQDLSEFYEDDQALRKEVETITDRI-IAAEVKASEVKQRSDXRSK 691
P+S+ G + ++D +FYE +A +K ++ + + I I ++ K++E S+ + K
Sbjct: 3 PTSVFGTKLHEQVEDRLKFYETGEAPKKNIDAMKEAIDIFSQEKSNEELPESEKKKK 59
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +2
Query: 449 QHEKSLQPLIDEYRQTTDEQRSACPPSSLLGNNWFDNLQDL--SEFYEDDQALRKE---- 610
+HE L+ L DE+ Q +++R + P S + + + L+ +E ED +A RKE
Sbjct: 1016 EHEDHLKSLKDEFIQVLEQERRSSPDSGM--SEALEELRQKLEAEHQEDIEATRKELIEQ 1073
Query: 611 VETITDRIIAAEVKASEVKQR 673
VE++ D + A + E +R
Sbjct: 1074 VESLRDELQEAATRDIEDAKR 1094
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +2
Query: 440 LFRQHEKSLQPLIDEYRQTTDEQRSACPP------SSLLGNNWFDNLQDLSEFYEDDQAL 601
L R+HEK + + +EY DEQR L N ++ Q +E E +
Sbjct: 353 LAREHEKEKRKIEEEYHAALDEQREKLDKEKDAEIEKLQQKNQYELQQKKTELIEKHEKA 412
Query: 602 RKEVETITDRIIAAEVKASEVKQRS 676
++V T D++ AE+ ++ K S
Sbjct: 413 MEDVLTELDQVQNAELGETKRKMSS 437
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 158 SKS*QLIKQVADNKRLCQTVGCGKETENKLLLQIREAEQVSDFERILNTNA 310
S++ +L+K+V K + + G +TE + L++ +E E+++ +LN A
Sbjct: 1324 SRNEELLKEVESLKENLKEIKDGSQTEKENLIEEKEREKLNAMNELLNAKA 1374
>SB_44950| Best HMM Match : rve (HMM E-Value=3.8e-12)
Length = 489
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 302 TNAILCERAKKHVWRACGPALKPSASVL 385
T A++ +R K WR PAL PSA+ L
Sbjct: 145 TAAVVAKRRKTPSWRTLAPALSPSATQL 172
>SB_32076| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 2352
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 302 TNAILCERAKKHVWRACGPALKPSASVL 385
T A++ +R K WR PAL PSA+ L
Sbjct: 2001 TAAVVAKRRKTPSWRTLAPALSPSATQL 2028
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/80 (21%), Positives = 40/80 (50%)
Frame = +2
Query: 446 RQHEKSLQPLIDEYRQTTDEQRSACPPSSLLGNNWFDNLQDLSEFYEDDQALRKEVETIT 625
++HE + L + ++TD+Q+ + L ++E +++++ LRKE+
Sbjct: 1142 KEHETLMDKLKQKIVRSTDQQKEKENETKTLAER-------MNEVFQENEMLRKELIAAA 1194
Query: 626 DRIIAAEVKASEVKQRSDXR 685
DRI + ++ E K ++ +
Sbjct: 1195 DRIDNLQRRSDEKKTKTQAK 1214
>SB_57682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 302 TNAILCERAKKHVWRACGPALKPSASVL 385
T A+ +R K WR PAL PSA+ L
Sbjct: 53 TAAVAAKRRKTPSWRTLAPALSPSATQL 80
>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
Length = 1486
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Frame = +2
Query: 479 DEYRQTTDEQRSACPPSSLLGN--NWFDNLQDLS-----EFYEDDQALRKEV--ETITDR 631
+E +T DE R C P +LG N L+D E Q L+K+V + + D+
Sbjct: 790 NEVLETKDEVRRVCVPRDMLGRNCNGEQRLEDTDFEQGLEKKVPQQGLKKKVLEQGLKDK 849
Query: 632 IIAAEVKASEVKQRSDXRS 688
+ + +KQR D ++
Sbjct: 850 VFEQGIDDKALKQRLDYKA 868
>SB_58744| Best HMM Match : ResIII (HMM E-Value=0.14)
Length = 831
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 320 ERAKKHVWRACGPALKPSASVLPRPRSSYSLYTV 421
E AK+ WR P LK S P YSL+ V
Sbjct: 58 EAAKQEPWREFDPLLKQKGSEGSGPEEYYSLFVV 91
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = -2
Query: 340 HVFLRAFAEYCISIKNPFK----VRHLFGFPDL***FVLRLFSAADSLTQPLVVGDLFYK 173
HV L + Y + PF R FG F ++ A+ LT VV D F
Sbjct: 374 HVQLEEESTYLTTFHTPFGRYRWKRMPFGISSAPEVFQRKMHEFAEGLTGTEVVADDFLY 433
Query: 172 LSRFRKG 152
LS+FRKG
Sbjct: 434 LSQFRKG 440
>SB_21867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 260 REAEQVSDFERILNTNAILCERAKKHVWRACGPALKPSASVL 385
RE S +N A +R K WR PAL PSA+ L
Sbjct: 328 RELAAASTRTPAVNQRASEAKRRKTPSWRILAPALSPSATQL 369
>SB_22008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 360 PLSRQHPSCRDRARPTLSTP*AKRTTIFSDSTKN 461
PL + R +PT +TP AKR T F+++ N
Sbjct: 17 PLQQWRSKICFRRKPTTTTPTAKRLTFFNENNIN 50
>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +3
Query: 279 LTLKGFLILMQYSANARRNTCGAPAVPPLSRQHPSCRDRARPTLSTP*AKR-TTIFSDST 455
LT + ++ +R CG P PP +R+ C D R + P + + S
Sbjct: 579 LTSRSGVLEQTSRPTSRVGVCGRPVSPPRTREAKLCDDGKRVFSAPPRVRHLDSTLSSID 638
Query: 456 KNLFSPSSMSTARPRTSNDPPAR 524
++ +S RP PA+
Sbjct: 639 NHVTRINSARKGRPLRPQSSPAK 661
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,815,041
Number of Sequences: 59808
Number of extensions: 367240
Number of successful extensions: 1361
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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