Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M05
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.7  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = +3

Query: 480 AFGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFAVRG 602
           AF  + K  D CQ     LH D         S+ H   ++G
Sbjct: 299 AFDPIEKIADVCQKYKLWLHVDAAWGGGALVSAKHRHLLKG 339


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 144 KFSVLIVSDKFKGKPLL 194
           KF  L+   KFK KPLL
Sbjct: 210 KFQPLLRLPKFKKKPLL 226


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 338 FFIVHYTLLKI*SISRV 388
           F+I  YTLL + S+ R+
Sbjct: 60  FYITSYTLLSVYSLFRI 76


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 338 FFIVHYTLLKI*SISRV 388
           F+I  YTLL + S+ R+
Sbjct: 60  FYITSYTLLSVYSLFRI 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,961
Number of Sequences: 336
Number of extensions: 3905
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)