Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M05
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-10|CAC48129.1| 106|Caenorhabditis elegans Hypothetical... 55 5e-08
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 55 6e-08
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 55 6e-08
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 55 6e-08
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z81120-6|CAH10814.1| 98|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U88168-2|AAC24398.1| 108|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 29 3.4
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 28 5.9
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL132876-10|CAC48129.1| 106|Caenorhabditis elegans Hypothetical
protein Y105E8A.11 protein.
Length = 106
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +3
Query: 96 CSNIEEVTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKT 266
C+ +E V D S+GCG+ F V++ + FKGK +A+H+ V ++L+E++K +H T KT
Sbjct: 48 CTRVE-VHDVSNGCGSMFDVVVEAAGFKGKSKVAQHKQVTSILREQIKDMHGLTIKT 103
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +1
Query: 445 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 624
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 14 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 70
Query: 625 EPTVKS 642
+ +K+
Sbjct: 71 KDLLKA 76
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +1
Query: 445 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 624
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 144 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 200
Query: 625 EPTVKS 642
+ +K+
Sbjct: 201 KDLLKA 206
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +1
Query: 445 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 624
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 44 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100
Query: 625 EPTVKS 642
+ +K+
Sbjct: 101 KDLLKA 106
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +1
Query: 445 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 624
VSAPGK+IL GEH+VVYG+TAIA S+ LR+ + + T + +++ LP + +++T L
Sbjct: 44 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100
Query: 625 EPTVKS 642
+ +K+
Sbjct: 101 KDLLKA 106
>Z81120-6|CAH10814.1| 98|Caenorhabditis elegans Hypothetical
protein T12D8.10 protein.
Length = 98
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 105 IEEVTDESDGC-GAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKTLTVDQ 281
I +V DES GC G KF +LIVS+ F+GK L HRLV L + HA T T ++
Sbjct: 20 ILKVVDESGGCDGYKFRLLIVSEAFEGKCTLQSHRLVQAALAPIMDETHALTICAYTPER 79
Query: 282 W 284
W
Sbjct: 80 W 80
>U88168-2|AAC24398.1| 108|Caenorhabditis elegans Hypothetical
protein K11H12.1 protein.
Length = 108
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 132 GCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEEL-KTIHAFTQKTLTVDQWKTQ 293
G F V +VSD+F+GK ++ RHRLVNT L +EL T+HA + +W Q
Sbjct: 40 GAEKHFRVQVVSDEFEGKRVIERHRLVNTCLAKELATTVHALRIDAIPTSKWDGQ 94
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 138 RIRRSHLSPPQYSSTFKFFKHAISLSLTNTIGQRAAAVARRLIGRP 1
R R SPP ++S F F+HAI S +++ A + L G P
Sbjct: 200 RYSRIPSSPPYWTSAFLTFQHAIESSFLSSVQSGAPDLPITLRGLP 245
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 138 RIRRSHLSPPQYSSTFKFFKHAISLSLTNTIGQRAAAVARRLIGRP 1
R R SPP ++S F F+HAI S +++ A + L G P
Sbjct: 200 RYSRIPSSPPYWTSAFLTFQHAIESSFLSSVQSGAPDLPITLRGLP 245
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 138 RIRRSHLSPPQYSSTFKFFKHAISLSLTNTIGQRAAAVARRLIGRP 1
R R SPP ++S F F+HAI S +++ A + L G P
Sbjct: 200 RYSRIPSSPPYWTSAFLTFQHAIESSFLSSVQSGAPDLPITLRGLP 245
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 138 RIRRSHLSPPQYSSTFKFFKHAISLSLTNTIGQRAAAVARRLIGRP 1
R R SPP ++S F F+HAI S +++ A + L G P
Sbjct: 200 RYSRIPSSPPYWTSAFLTFQHAIESSFLSSVQSGAPDLPITLRGLP 245
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 254 ERVDCLQFLLKQCVHQSMPGKKRF 183
+++ Q+LL+QCV S G++RF
Sbjct: 353 QQIHSAQYLLQQCVRNSTQGRERF 376
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 254 ERVDCLQFLLKQCVHQSMPGKKRF 183
+++ Q+LL+QCV S G++RF
Sbjct: 370 QQIHSAQYLLQQCVRNSTQGRERF 393
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -3
Query: 194 KKRFPFELVRYYENRKLGAASVALICHLLNIRALSNFLN 78
+KR+ F++ + GAAS+A++ L + +L N +N
Sbjct: 10 EKRYHFDMEKILVTISTGAASIAVLAVLFTVPSLYNTIN 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,302,169
Number of Sequences: 27780
Number of extensions: 377644
Number of successful extensions: 1033
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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